RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
CCDC90B-214ENST00000529689 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
CCDC90B-214ENST00000529689 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
CCDC90B-214ENST00000529689 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
CCDC90B-214ENST00000529689 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
CCDC90B-214ENST00000529689 MT1LQ93083 61 aa3.31□□□□□ -1.88
CCDC90B-214ENST00000529689 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
CCDC90B-214ENST00000529689 MT1EP04732 61 aa3.28□□□□□ -1.88
CCDC90B-214ENST00000529689 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
CCDC90B-214ENST00000529689 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.89
CCDC90B-214ENST00000529689 KRTAP9-6A0A140TA67 174 aa3.23□□□□□ -1.89
CCDC90B-214ENST00000529689 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
CCDC90B-214ENST00000529689 SPRR2EP22531 72 aa3.18□□□□□ -1.9
CCDC90B-214ENST00000529689 SPRR2BP35325 72 aa3.18□□□□□ -1.9
CCDC90B-214ENST00000529689 SPRR2AP35326 72 aa3.18□□□□□ -1.9
CCDC90B-214ENST00000529689 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
CCDC90B-214ENST00000529689 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
CCDC90B-214ENST00000529689 MT1MQ8N339 61 aa3.13□□□□□ -1.91
CCDC90B-214ENST00000529689 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
CCDC90B-214ENST00000529689 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
CCDC90B-214ENST00000529689 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
CCDC90B-214ENST00000529689 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
CCDC90B-214ENST00000529689 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
CCDC90B-214ENST00000529689 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
CCDC90B-214ENST00000529689 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
CCDC90B-214ENST00000529689 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CCDC90B-214ENST00000529689 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
CCDC90B-214ENST00000529689 KRTAP9-7A8MTY7 169 aa2.92□□□□□ -1.94
CCDC90B-214ENST00000529689 MT4P47944 62 aa2.92□□□□□ -1.94
CCDC90B-214ENST00000529689 PRM1P04553 51 aa2.9□□□□□ -1.95
CCDC90B-214ENST00000529689 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
CCDC90B-214ENST00000529689 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
CCDC90B-214ENST00000529689 LCE5AQ5TCM9 118 aa2.84□□□□□ -1.96
CCDC90B-214ENST00000529689 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
CCDC90B-214ENST00000529689 MT1AP04731 61 aa2.79□□□□□ -1.96
CCDC90B-214ENST00000529689 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.77□□□□□ -1.97
CCDC90B-214ENST00000529689 MT3P25713 68 aa2.74□□□□□ -1.97
CCDC90B-214ENST00000529689 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
CCDC90B-214ENST00000529689 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
CCDC90B-214ENST00000529689 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
CCDC90B-214ENST00000529689 NEBP20929 6669 aa2.67□□□□□ -1.98
CCDC90B-214ENST00000529689 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
CCDC90B-214ENST00000529689 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CCDC90B-214ENST00000529689 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
CCDC90B-214ENST00000529689 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
CCDC90B-214ENST00000529689 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
CCDC90B-214ENST00000529689 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
CCDC90B-214ENST00000529689 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
CCDC90B-214ENST00000529689 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CCDC90B-214ENST00000529689 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
CCDC90B-214ENST00000529689 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
CCDC90B-214ENST00000529689 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
CCDC90B-214ENST00000529689 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
CCDC90B-214ENST00000529689 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CCDC90B-214ENST00000529689 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
CCDC90B-214ENST00000529689 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
CCDC90B-214ENST00000529689 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CCDC90B-214ENST00000529689 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
CCDC90B-214ENST00000529689 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
CCDC90B-214ENST00000529689 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
CCDC90B-214ENST00000529689 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CCDC90B-214ENST00000529689 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CCDC90B-214ENST00000529689 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
CCDC90B-214ENST00000529689 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
CCDC90B-214ENST00000529689 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
CCDC90B-214ENST00000529689 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
CCDC90B-214ENST00000529689 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CCDC90B-214ENST00000529689 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
CCDC90B-214ENST00000529689 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
CCDC90B-214ENST00000529689 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
CCDC90B-214ENST00000529689 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
CCDC90B-214ENST00000529689 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
CCDC90B-214ENST00000529689 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
CCDC90B-214ENST00000529689 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
CCDC90B-214ENST00000529689 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CCDC90B-214ENST00000529689 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CCDC90B-214ENST00000529689 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms