RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PSPHP1O15172 72 aa5.07□□□□□ -1.6
CAPN1-216ENST00000528739 MT1LQ93083 61 aa5.07□□□□□ -1.6
CAPN1-216ENST00000528739 V9GYY9 64 aa5.07□□□□□ -1.6
CAPN1-216ENST00000528739 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
CAPN1-216ENST00000528739 MT1MQ8N339 61 aa5.05□□□□□ -1.6
CAPN1-216ENST00000528739 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
CAPN1-216ENST00000528739 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
CAPN1-216ENST00000528739 Q1T7F1 81 aa4.98□□□□□ -1.61
CAPN1-216ENST00000528739 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
CAPN1-216ENST00000528739 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
CAPN1-216ENST00000528739 A6NED7 52 aa4.92□□□□□ -1.62
CAPN1-216ENST00000528739 MT4P47944 62 aa4.88□□□□□ -1.63
CAPN1-216ENST00000528739 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CAPN1-216ENST00000528739 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
CAPN1-216ENST00000528739 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CAPN1-216ENST00000528739 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
CAPN1-216ENST00000528739 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
CAPN1-216ENST00000528739 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
CAPN1-216ENST00000528739 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CAPN1-216ENST00000528739 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
CAPN1-216ENST00000528739 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
CAPN1-216ENST00000528739 ROMO1P60602 79 aa4.68□□□□□ -1.66
CAPN1-216ENST00000528739 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
CAPN1-216ENST00000528739 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
CAPN1-216ENST00000528739 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CAPN1-216ENST00000528739 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
CAPN1-216ENST00000528739 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
CAPN1-216ENST00000528739 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
CAPN1-216ENST00000528739 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
CAPN1-216ENST00000528739 AHNAK2Q8IVF2 5795 aa4.54□□□□□ -1.68
CAPN1-216ENST00000528739 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
CAPN1-216ENST00000528739 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
CAPN1-216ENST00000528739 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
CAPN1-216ENST00000528739 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
CAPN1-216ENST00000528739 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
CAPN1-216ENST00000528739 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CAPN1-216ENST00000528739 MT1AP04731 61 aa4.32□□□□□ -1.72
CAPN1-216ENST00000528739 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
CAPN1-216ENST00000528739 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
CAPN1-216ENST00000528739 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
CAPN1-216ENST00000528739 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
CAPN1-216ENST00000528739 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
CAPN1-216ENST00000528739 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CAPN1-216ENST00000528739 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
CAPN1-216ENST00000528739 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
CAPN1-216ENST00000528739 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CAPN1-216ENST00000528739 MT3P25713 68 aa3.99□□□□□ -1.77
CAPN1-216ENST00000528739 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CAPN1-216ENST00000528739 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
CAPN1-216ENST00000528739 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
CAPN1-216ENST00000528739 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
CAPN1-216ENST00000528739 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
CAPN1-216ENST00000528739 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
CAPN1-216ENST00000528739 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
CAPN1-216ENST00000528739 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
CAPN1-216ENST00000528739 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
CAPN1-216ENST00000528739 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CAPN1-216ENST00000528739 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
CAPN1-216ENST00000528739 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CAPN1-216ENST00000528739 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CAPN1-216ENST00000528739 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CAPN1-216ENST00000528739 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
CAPN1-216ENST00000528739 H3BS24 57 aa3.22□□□□□ -1.89
CAPN1-216ENST00000528739 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
CAPN1-216ENST00000528739 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
CAPN1-216ENST00000528739 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
CAPN1-216ENST00000528739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CAPN1-216ENST00000528739 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CAPN1-216ENST00000528739 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
CAPN1-216ENST00000528739 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
CAPN1-216ENST00000528739 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CAPN1-216ENST00000528739 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
CAPN1-216ENST00000528739 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CAPN1-216ENST00000528739 INE1O15225 51 aa2.59□□□□□ -1.99
CAPN1-216ENST00000528739 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CAPN1-216ENST00000528739 PRM1P04553 51 aa2.4□□□□□ -2.03
CAPN1-216ENST00000528739 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CAPN1-216ENST00000528739 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 105.4 ms