RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
SDHD-204ENST00000528021 SMIM26A0A096LP01 95 aa4.81□□□□□ -1.64
SDHD-204ENST00000528021 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
SDHD-204ENST00000528021 SPRR2EP22531 72 aa4.78□□□□□ -1.64
SDHD-204ENST00000528021 SPRR2BP35325 72 aa4.78□□□□□ -1.64
SDHD-204ENST00000528021 SPRR2AP35326 72 aa4.78□□□□□ -1.64
SDHD-204ENST00000528021 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
SDHD-204ENST00000528021 TMEM258P61165 79 aa4.76□□□□□ -1.65
SDHD-204ENST00000528021 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
SDHD-204ENST00000528021 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
SDHD-204ENST00000528021 LCE1FQ5T754 118 aa4.72□□□□□ -1.65
SDHD-204ENST00000528021 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
SDHD-204ENST00000528021 A8MU10 97 aa4.68□□□□□ -1.66
SDHD-204ENST00000528021 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
SDHD-204ENST00000528021 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
SDHD-204ENST00000528021 SPRR2DP22532 72 aa4.62□□□□□ -1.67
SDHD-204ENST00000528021 UQCR11O14957 56 aa4.61□□□□□ -1.67
SDHD-204ENST00000528021 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
SDHD-204ENST00000528021 V9GYY9 64 aa4.56□□□□□ -1.68
SDHD-204ENST00000528021 TNP1P09430 55 aa4.55□□□□□ -1.68
SDHD-204ENST00000528021 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
SDHD-204ENST00000528021 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
SDHD-204ENST00000528021 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
SDHD-204ENST00000528021 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
SDHD-204ENST00000528021 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
SDHD-204ENST00000528021 MT1EP04732 61 aa4.49□□□□□ -1.69
SDHD-204ENST00000528021 K7ERS5 55 aa4.48□□□□□ -1.69
SDHD-204ENST00000528021 PSPHP1O15172 72 aa4.47□□□□□ -1.69
SDHD-204ENST00000528021 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
SDHD-204ENST00000528021 Q1T7F1 81 aa4.46□□□□□ -1.7
SDHD-204ENST00000528021 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
SDHD-204ENST00000528021 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SDHD-204ENST00000528021 MT1GP13640 62 aa4.38□□□□□ -1.71
SDHD-204ENST00000528021 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
SDHD-204ENST00000528021 A6NED7 52 aa4.36□□□□□ -1.71
SDHD-204ENST00000528021 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
SDHD-204ENST00000528021 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
SDHD-204ENST00000528021 MT1LQ93083 61 aa4.3□□□□□ -1.72
SDHD-204ENST00000528021 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
SDHD-204ENST00000528021 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SDHD-204ENST00000528021 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
SDHD-204ENST00000528021 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SDHD-204ENST00000528021 ROMO1P60602 79 aa4.13□□□□□ -1.75
SDHD-204ENST00000528021 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
SDHD-204ENST00000528021 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SDHD-204ENST00000528021 MT4P47944 62 aa4.03□□□□□ -1.76
SDHD-204ENST00000528021 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
SDHD-204ENST00000528021 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
SDHD-204ENST00000528021 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
SDHD-204ENST00000528021 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
SDHD-204ENST00000528021 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
SDHD-204ENST00000528021 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
SDHD-204ENST00000528021 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
SDHD-204ENST00000528021 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
SDHD-204ENST00000528021 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
SDHD-204ENST00000528021 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SDHD-204ENST00000528021 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
SDHD-204ENST00000528021 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
SDHD-204ENST00000528021 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SDHD-204ENST00000528021 MT1AP04731 61 aa3.67□□□□□ -1.82
SDHD-204ENST00000528021 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
SDHD-204ENST00000528021 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
SDHD-204ENST00000528021 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
SDHD-204ENST00000528021 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
SDHD-204ENST00000528021 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SDHD-204ENST00000528021 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SDHD-204ENST00000528021 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
SDHD-204ENST00000528021 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SDHD-204ENST00000528021 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
SDHD-204ENST00000528021 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
SDHD-204ENST00000528021 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SDHD-204ENST00000528021 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
SDHD-204ENST00000528021 INE1O15225 51 aa2.53□□□□□ -2
SDHD-204ENST00000528021 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SDHD-204ENST00000528021 PRM1P04553 51 aa2.09□□□□□ -2.07
SDHD-204ENST00000528021 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SDHD-204ENST00000528021 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 7.7 ms