RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
CTTN-212ENST00000527962 COX7CP15954 63 aa5.31□□□□□ -1.56
CTTN-212ENST00000527962 A0A1B0GU69 56 aa5.28□□□□□ -1.56
CTTN-212ENST00000527962 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
CTTN-212ENST00000527962 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
CTTN-212ENST00000527962 A8MU10 97 aa5.24□□□□□ -1.57
CTTN-212ENST00000527962 H7BZZ5 65 aa5.24□□□□□ -1.57
CTTN-212ENST00000527962 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
CTTN-212ENST00000527962 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
CTTN-212ENST00000527962 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
CTTN-212ENST00000527962 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
CTTN-212ENST00000527962 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
CTTN-212ENST00000527962 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
CTTN-212ENST00000527962 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CTTN-212ENST00000527962 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
CTTN-212ENST00000527962 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
CTTN-212ENST00000527962 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
CTTN-212ENST00000527962 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
CTTN-212ENST00000527962 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
CTTN-212ENST00000527962 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
CTTN-212ENST00000527962 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
CTTN-212ENST00000527962 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
CTTN-212ENST00000527962 UQCR11O14957 56 aa4.88□□□□□ -1.63
CTTN-212ENST00000527962 TMEM258P61165 79 aa4.82□□□□□ -1.64
CTTN-212ENST00000527962 K7ERS5 55 aa4.78□□□□□ -1.64
CTTN-212ENST00000527962 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
CTTN-212ENST00000527962 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
CTTN-212ENST00000527962 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
CTTN-212ENST00000527962 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
CTTN-212ENST00000527962 MT1AP04731 61 aa4.74□□□□□ -1.65
CTTN-212ENST00000527962 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
CTTN-212ENST00000527962 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
CTTN-212ENST00000527962 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
CTTN-212ENST00000527962 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
CTTN-212ENST00000527962 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
CTTN-212ENST00000527962 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
CTTN-212ENST00000527962 V9GYY9 64 aa4.65□□□□□ -1.67
CTTN-212ENST00000527962 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
CTTN-212ENST00000527962 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
CTTN-212ENST00000527962 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
CTTN-212ENST00000527962 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
CTTN-212ENST00000527962 PSPHP1O15172 72 aa4.53□□□□□ -1.68
CTTN-212ENST00000527962 Q1T7F1 81 aa4.53□□□□□ -1.68
CTTN-212ENST00000527962 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
CTTN-212ENST00000527962 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CTTN-212ENST00000527962 A6NED7 52 aa4.42□□□□□ -1.7
CTTN-212ENST00000527962 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
CTTN-212ENST00000527962 MT3P25713 68 aa4.4□□□□□ -1.71
CTTN-212ENST00000527962 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
CTTN-212ENST00000527962 ROMO1P60602 79 aa4.32□□□□□ -1.72
CTTN-212ENST00000527962 PCP4P48539 62 aa4.19□□□□□ -1.74
CTTN-212ENST00000527962 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
CTTN-212ENST00000527962 H3BS24 57 aa4.09□□□□□ -1.75
CTTN-212ENST00000527962 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CTTN-212ENST00000527962 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
CTTN-212ENST00000527962 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CTTN-212ENST00000527962 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
CTTN-212ENST00000527962 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CTTN-212ENST00000527962 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
CTTN-212ENST00000527962 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CTTN-212ENST00000527962 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
CTTN-212ENST00000527962 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CTTN-212ENST00000527962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
CTTN-212ENST00000527962 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
CTTN-212ENST00000527962 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
CTTN-212ENST00000527962 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
CTTN-212ENST00000527962 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
CTTN-212ENST00000527962 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
CTTN-212ENST00000527962 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
CTTN-212ENST00000527962 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
CTTN-212ENST00000527962 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CTTN-212ENST00000527962 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
CTTN-212ENST00000527962 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
CTTN-212ENST00000527962 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
CTTN-212ENST00000527962 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
CTTN-212ENST00000527962 INE1O15225 51 aa2.18□□□□□ -2.06
CTTN-212ENST00000527962 PRM1P04553 51 aa2.16□□□□□ -2.06
CTTN-212ENST00000527962 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms