RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
CKLF-CMTM1-202ENST00000527845 AHNAK2Q8IVF2 5795 aa6.01□□□□□ -1.45
CKLF-CMTM1-202ENST00000527845 H7BZZ5 65 aa5.99□□□□□ -1.45
CKLF-CMTM1-202ENST00000527845 A8MU10 97 aa5.97□□□□□ -1.45
CKLF-CMTM1-202ENST00000527845 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
CKLF-CMTM1-202ENST00000527845 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
CKLF-CMTM1-202ENST00000527845 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
CKLF-CMTM1-202ENST00000527845 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
CKLF-CMTM1-202ENST00000527845 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CKLF-CMTM1-202ENST00000527845 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CKLF-CMTM1-202ENST00000527845 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
CKLF-CMTM1-202ENST00000527845 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
CKLF-CMTM1-202ENST00000527845 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
CKLF-CMTM1-202ENST00000527845 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
CKLF-CMTM1-202ENST00000527845 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
CKLF-CMTM1-202ENST00000527845 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
CKLF-CMTM1-202ENST00000527845 ATP5EP56381 51 aaPredicted RBP5.67□□□□□ -1.5
CKLF-CMTM1-202ENST00000527845 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
CKLF-CMTM1-202ENST00000527845 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
CKLF-CMTM1-202ENST00000527845 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CKLF-CMTM1-202ENST00000527845 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
CKLF-CMTM1-202ENST00000527845 UQCR11O14957 56 aa5.6□□□□□ -1.51
CKLF-CMTM1-202ENST00000527845 H3BS24 57 aa5.57□□□□□ -1.52
CKLF-CMTM1-202ENST00000527845 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
CKLF-CMTM1-202ENST00000527845 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
CKLF-CMTM1-202ENST00000527845 K7ERS5 55 aa5.45□□□□□ -1.54
CKLF-CMTM1-202ENST00000527845 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
CKLF-CMTM1-202ENST00000527845 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
CKLF-CMTM1-202ENST00000527845 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
CKLF-CMTM1-202ENST00000527845 TMEM258P61165 79 aa5.36□□□□□ -1.55
CKLF-CMTM1-202ENST00000527845 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
CKLF-CMTM1-202ENST00000527845 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
CKLF-CMTM1-202ENST00000527845 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
CKLF-CMTM1-202ENST00000527845 MT1AP04731 61 aa5.29□□□□□ -1.56
CKLF-CMTM1-202ENST00000527845 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
CKLF-CMTM1-202ENST00000527845 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
CKLF-CMTM1-202ENST00000527845 V9GYY9 64 aa5.19□□□□□ -1.58
CKLF-CMTM1-202ENST00000527845 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
CKLF-CMTM1-202ENST00000527845 PSPHP1O15172 72 aa5.11□□□□□ -1.59
CKLF-CMTM1-202ENST00000527845 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.59
CKLF-CMTM1-202ENST00000527845 Q1T7F1 81 aa5.07□□□□□ -1.6
CKLF-CMTM1-202ENST00000527845 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
CKLF-CMTM1-202ENST00000527845 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
CKLF-CMTM1-202ENST00000527845 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 A6NED7 52 aa4.97□□□□□ -1.61
CKLF-CMTM1-202ENST00000527845 ROMO1P60602 79 aa4.96□□□□□ -1.62
CKLF-CMTM1-202ENST00000527845 MT3P25713 68 aa4.87□□□□□ -1.63
CKLF-CMTM1-202ENST00000527845 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
CKLF-CMTM1-202ENST00000527845 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
CKLF-CMTM1-202ENST00000527845 PCP4P48539 62 aa4.36□□□□□ -1.71
CKLF-CMTM1-202ENST00000527845 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
CKLF-CMTM1-202ENST00000527845 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
CKLF-CMTM1-202ENST00000527845 SVIPQ8NHG7 77 aa4.14□□□□□ -1.75
CKLF-CMTM1-202ENST00000527845 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
CKLF-CMTM1-202ENST00000527845 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
CKLF-CMTM1-202ENST00000527845 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CKLF-CMTM1-202ENST00000527845 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
CKLF-CMTM1-202ENST00000527845 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
CKLF-CMTM1-202ENST00000527845 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
CKLF-CMTM1-202ENST00000527845 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
CKLF-CMTM1-202ENST00000527845 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
CKLF-CMTM1-202ENST00000527845 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
CKLF-CMTM1-202ENST00000527845 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
CKLF-CMTM1-202ENST00000527845 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
CKLF-CMTM1-202ENST00000527845 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CKLF-CMTM1-202ENST00000527845 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
CKLF-CMTM1-202ENST00000527845 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CKLF-CMTM1-202ENST00000527845 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
CKLF-CMTM1-202ENST00000527845 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
CKLF-CMTM1-202ENST00000527845 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
CKLF-CMTM1-202ENST00000527845 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CKLF-CMTM1-202ENST00000527845 PRM1P04553 51 aa2.49□□□□□ -2.01
CKLF-CMTM1-202ENST00000527845 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
CKLF-CMTM1-202ENST00000527845 INE1O15225 51 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 109.8 ms