RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SCN3B-204ENST00000527836 MT1GP13640 62 aa4.5□□□□□ -1.69
SCN3B-204ENST00000527836 A8MU10 97 aa4.49□□□□□ -1.69
SCN3B-204ENST00000527836 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
SCN3B-204ENST00000527836 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
SCN3B-204ENST00000527836 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
SCN3B-204ENST00000527836 TNP1P09430 55 aa4.46□□□□□ -1.7
SCN3B-204ENST00000527836 V9GYY9 64 aa4.43□□□□□ -1.7
SCN3B-204ENST00000527836 RPS28P62857 69 aaKnown RBP4.4□□□□□ -1.71
SCN3B-204ENST00000527836 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
SCN3B-204ENST00000527836 MT1MQ8N339 61 aa4.4□□□□□ -1.71
SCN3B-204ENST00000527836 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
SCN3B-204ENST00000527836 LINC01558Q9Y6Z2 57 aa4.4□□□□□ -1.71
SCN3B-204ENST00000527836 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
SCN3B-204ENST00000527836 MT1LQ93083 61 aa4.39□□□□□ -1.71
SCN3B-204ENST00000527836 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
SCN3B-204ENST00000527836 MT4P47944 62 aa4.35□□□□□ -1.71
SCN3B-204ENST00000527836 Q1T7F1 81 aa4.33□□□□□ -1.72
SCN3B-204ENST00000527836 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
SCN3B-204ENST00000527836 UQCR11O14957 56 aa4.3□□□□□ -1.72
SCN3B-204ENST00000527836 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
SCN3B-204ENST00000527836 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
SCN3B-204ENST00000527836 PSPHP1O15172 72 aa4.28□□□□□ -1.72
SCN3B-204ENST00000527836 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SCN3B-204ENST00000527836 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
SCN3B-204ENST00000527836 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
SCN3B-204ENST00000527836 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
SCN3B-204ENST00000527836 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
SCN3B-204ENST00000527836 A6NED7 52 aa4.2□□□□□ -1.74
SCN3B-204ENST00000527836 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
SCN3B-204ENST00000527836 K7ERS5 55 aa4.17□□□□□ -1.74
SCN3B-204ENST00000527836 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
SCN3B-204ENST00000527836 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SCN3B-204ENST00000527836 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
SCN3B-204ENST00000527836 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
SCN3B-204ENST00000527836 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
SCN3B-204ENST00000527836 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
SCN3B-204ENST00000527836 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
SCN3B-204ENST00000527836 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SCN3B-204ENST00000527836 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
SCN3B-204ENST00000527836 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
SCN3B-204ENST00000527836 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
SCN3B-204ENST00000527836 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
SCN3B-204ENST00000527836 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
SCN3B-204ENST00000527836 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SCN3B-204ENST00000527836 ROMO1P60602 79 aa3.85□□□□□ -1.79
SCN3B-204ENST00000527836 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SCN3B-204ENST00000527836 MT1AP04731 61 aa3.75□□□□□ -1.81
SCN3B-204ENST00000527836 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
SCN3B-204ENST00000527836 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
SCN3B-204ENST00000527836 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
SCN3B-204ENST00000527836 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
SCN3B-204ENST00000527836 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SCN3B-204ENST00000527836 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
SCN3B-204ENST00000527836 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SCN3B-204ENST00000527836 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SCN3B-204ENST00000527836 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
SCN3B-204ENST00000527836 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
SCN3B-204ENST00000527836 MT3P25713 68 aa3.46□□□□□ -1.86
SCN3B-204ENST00000527836 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
SCN3B-204ENST00000527836 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
SCN3B-204ENST00000527836 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SCN3B-204ENST00000527836 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
SCN3B-204ENST00000527836 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SCN3B-204ENST00000527836 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SCN3B-204ENST00000527836 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SCN3B-204ENST00000527836 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
SCN3B-204ENST00000527836 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SCN3B-204ENST00000527836 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
SCN3B-204ENST00000527836 INE1O15225 51 aa2.74□□□□□ -1.97
SCN3B-204ENST00000527836 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SCN3B-204ENST00000527836 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SCN3B-204ENST00000527836 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SCN3B-204ENST00000527836 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
SCN3B-204ENST00000527836 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
SCN3B-204ENST00000527836 PRM1P04553 51 aa1.96□□□□□ -2.1
SCN3B-204ENST00000527836 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SCN3B-204ENST00000527836 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 53.2 ms