RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LCE2DQ5TA82 110 aaPredicted RBP3.82□□□□□ -1.8
LINC01001-201ENST00000526704 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
LINC01001-201ENST00000526704 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
LINC01001-201ENST00000526704 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
LINC01001-201ENST00000526704 MT1MQ8N339 61 aa3.77□□□□□ -1.81
LINC01001-201ENST00000526704 MT1GP13640 62 aa3.76□□□□□ -1.81
LINC01001-201ENST00000526704 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
LINC01001-201ENST00000526704 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
LINC01001-201ENST00000526704 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
LINC01001-201ENST00000526704 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
LINC01001-201ENST00000526704 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
LINC01001-201ENST00000526704 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
LINC01001-201ENST00000526704 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
LINC01001-201ENST00000526704 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
LINC01001-201ENST00000526704 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
LINC01001-201ENST00000526704 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
LINC01001-201ENST00000526704 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
LINC01001-201ENST00000526704 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
LINC01001-201ENST00000526704 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
LINC01001-201ENST00000526704 MT1AP04731 61 aa3.4□□□□□ -1.87
LINC01001-201ENST00000526704 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
LINC01001-201ENST00000526704 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
LINC01001-201ENST00000526704 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
LINC01001-201ENST00000526704 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
LINC01001-201ENST00000526704 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
LINC01001-201ENST00000526704 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
LINC01001-201ENST00000526704 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
LINC01001-201ENST00000526704 SPRR2EP22531 72 aa3.25□□□□□ -1.89
LINC01001-201ENST00000526704 SPRR2BP35325 72 aa3.25□□□□□ -1.89
LINC01001-201ENST00000526704 SPRR2AP35326 72 aa3.25□□□□□ -1.89
LINC01001-201ENST00000526704 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
LINC01001-201ENST00000526704 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
LINC01001-201ENST00000526704 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
LINC01001-201ENST00000526704 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
LINC01001-201ENST00000526704 PRM1P04553 51 aa3.16□□□□□ -1.9
LINC01001-201ENST00000526704 SPRR2DP22532 72 aa3.11□□□□□ -1.91
LINC01001-201ENST00000526704 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
LINC01001-201ENST00000526704 MT3P25713 68 aa3.02□□□□□ -1.93
LINC01001-201ENST00000526704 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
LINC01001-201ENST00000526704 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
LINC01001-201ENST00000526704 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
LINC01001-201ENST00000526704 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
LINC01001-201ENST00000526704 NEBP20929 6669 aa2.82□□□□□ -1.96
LINC01001-201ENST00000526704 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
LINC01001-201ENST00000526704 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
LINC01001-201ENST00000526704 MT4P47944 62 aa2.74□□□□□ -1.97
LINC01001-201ENST00000526704 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
LINC01001-201ENST00000526704 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
LINC01001-201ENST00000526704 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
LINC01001-201ENST00000526704 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
LINC01001-201ENST00000526704 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
LINC01001-201ENST00000526704 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
LINC01001-201ENST00000526704 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
LINC01001-201ENST00000526704 LCE1DQ5T752 114 aa2.57□□□□□ -2
LINC01001-201ENST00000526704 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
LINC01001-201ENST00000526704 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
LINC01001-201ENST00000526704 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
LINC01001-201ENST00000526704 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
LINC01001-201ENST00000526704 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
LINC01001-201ENST00000526704 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
LINC01001-201ENST00000526704 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
LINC01001-201ENST00000526704 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
LINC01001-201ENST00000526704 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
LINC01001-201ENST00000526704 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
LINC01001-201ENST00000526704 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
LINC01001-201ENST00000526704 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
LINC01001-201ENST00000526704 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
LINC01001-201ENST00000526704 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
LINC01001-201ENST00000526704 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
LINC01001-201ENST00000526704 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
LINC01001-201ENST00000526704 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
LINC01001-201ENST00000526704 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
LINC01001-201ENST00000526704 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
LINC01001-201ENST00000526704 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
LINC01001-201ENST00000526704 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
LINC01001-201ENST00000526704 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
LINC01001-201ENST00000526704 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 38.8 ms