RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
CCS-203ENST00000526058 MT1MQ8N339 61 aa6.03□□□□□ -1.44
CCS-203ENST00000526058 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
CCS-203ENST00000526058 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
CCS-203ENST00000526058 V9GYY9 64 aa5.95□□□□□ -1.46
CCS-203ENST00000526058 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
CCS-203ENST00000526058 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
CCS-203ENST00000526058 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
CCS-203ENST00000526058 PSPHP1O15172 72 aa5.87□□□□□ -1.47
CCS-203ENST00000526058 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
CCS-203ENST00000526058 Q1T7F1 81 aa5.83□□□□□ -1.48
CCS-203ENST00000526058 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
CCS-203ENST00000526058 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
CCS-203ENST00000526058 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
CCS-203ENST00000526058 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CCS-203ENST00000526058 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
CCS-203ENST00000526058 K7ERS5 55 aa5.78□□□□□ -1.48
CCS-203ENST00000526058 MT4P47944 62 aa5.76□□□□□ -1.49
CCS-203ENST00000526058 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
CCS-203ENST00000526058 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
CCS-203ENST00000526058 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
CCS-203ENST00000526058 A6NED7 52 aa5.67□□□□□ -1.5
CCS-203ENST00000526058 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
CCS-203ENST00000526058 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
CCS-203ENST00000526058 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
CCS-203ENST00000526058 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CCS-203ENST00000526058 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
CCS-203ENST00000526058 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
CCS-203ENST00000526058 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
CCS-203ENST00000526058 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
CCS-203ENST00000526058 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
CCS-203ENST00000526058 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
CCS-203ENST00000526058 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
CCS-203ENST00000526058 ROMO1P60602 79 aa5.43□□□□□ -1.54
CCS-203ENST00000526058 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
CCS-203ENST00000526058 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
CCS-203ENST00000526058 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
CCS-203ENST00000526058 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
CCS-203ENST00000526058 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
CCS-203ENST00000526058 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CCS-203ENST00000526058 H3BS24 57 aa5.33□□□□□ -1.56
CCS-203ENST00000526058 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
CCS-203ENST00000526058 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CCS-203ENST00000526058 MT1AP04731 61 aa5.14□□□□□ -1.59
CCS-203ENST00000526058 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
CCS-203ENST00000526058 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
CCS-203ENST00000526058 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
CCS-203ENST00000526058 MUC5ACP98088 5654 aa5□□□□□ -1.61
CCS-203ENST00000526058 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
CCS-203ENST00000526058 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
CCS-203ENST00000526058 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
CCS-203ENST00000526058 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
CCS-203ENST00000526058 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
CCS-203ENST00000526058 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
CCS-203ENST00000526058 MT3P25713 68 aa4.69□□□□□ -1.66
CCS-203ENST00000526058 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
CCS-203ENST00000526058 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
CCS-203ENST00000526058 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
CCS-203ENST00000526058 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CCS-203ENST00000526058 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
CCS-203ENST00000526058 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
CCS-203ENST00000526058 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
CCS-203ENST00000526058 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
CCS-203ENST00000526058 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
CCS-203ENST00000526058 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
CCS-203ENST00000526058 INE1O15225 51 aa3.74□□□□□ -1.81
CCS-203ENST00000526058 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
CCS-203ENST00000526058 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
CCS-203ENST00000526058 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
CCS-203ENST00000526058 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
CCS-203ENST00000526058 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CCS-203ENST00000526058 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CCS-203ENST00000526058 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
CCS-203ENST00000526058 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
CCS-203ENST00000526058 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
CCS-203ENST00000526058 PRM1P04553 51 aa2.8□□□□□ -1.96
CCS-203ENST00000526058 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CCS-203ENST00000526058 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms