RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 PRR15LQ9BU68 103 aa8.48□□□□□ -1.05
ROM1-203ENST00000525947 HMCN1Q96RW7 5635 aa8.37□□□□□ -1.07
ROM1-203ENST00000525947 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
ROM1-203ENST00000525947 LINC01558Q9Y6Z2 57 aa8.37□□□□□ -1.07
ROM1-203ENST00000525947 KRTAP5-4Q6L8H1 288 aa8.36□□□□□ -1.07
ROM1-203ENST00000525947 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
ROM1-203ENST00000525947 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
ROM1-203ENST00000525947 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
ROM1-203ENST00000525947 UQCR11O14957 56 aa8.2□□□□□ -1.1
ROM1-203ENST00000525947 AHNAK2Q8IVF2 5795 aa8.19□□□□□ -1.1
ROM1-203ENST00000525947 TMEM258P61165 79 aa8.09□□□□□ -1.11
ROM1-203ENST00000525947 KRTAP5-10Q6L8G5 202 aa8.09□□□□□ -1.11
ROM1-203ENST00000525947 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
ROM1-203ENST00000525947 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
ROM1-203ENST00000525947 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
ROM1-203ENST00000525947 KRTAP20-2Q3LI61 65 aa7.94□□□□□ -1.14
ROM1-203ENST00000525947 LOC100996750A0A140TA64 210 aa7.91□□□□□ -1.14
ROM1-203ENST00000525947 KRTAP5-3Q6L8H2 238 aa7.89□□□□□ -1.15
ROM1-203ENST00000525947 K7ERS5 55 aa7.88□□□□□ -1.15
ROM1-203ENST00000525947 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
ROM1-203ENST00000525947 KRTAP12-4P60329 112 aa7.82□□□□□ -1.16
ROM1-203ENST00000525947 PSPHP1O15172 72 aa7.81□□□□□ -1.16
ROM1-203ENST00000525947 KRTAP5-7Q6L8G8 165 aa7.79□□□□□ -1.16
ROM1-203ENST00000525947 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
ROM1-203ENST00000525947 SYNE1Q8NF91 8797 aaKnown RBP7.7□□□□□ -1.18
ROM1-203ENST00000525947 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
ROM1-203ENST00000525947 V9GYY9 64 aa7.69□□□□□ -1.18
ROM1-203ENST00000525947 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
ROM1-203ENST00000525947 Q1T7F1 81 aa7.64□□□□□ -1.19
ROM1-203ENST00000525947 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
ROM1-203ENST00000525947 A6NED7 52 aa7.5□□□□□ -1.21
ROM1-203ENST00000525947 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
ROM1-203ENST00000525947 KRTAP6-1Q3LI64 71 aa7.4□□□□□ -1.22
ROM1-203ENST00000525947 MT1AP04731 61 aa7.39□□□□□ -1.23
ROM1-203ENST00000525947 ROMO1P60602 79 aa7.32□□□□□ -1.24
ROM1-203ENST00000525947 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
ROM1-203ENST00000525947 KRTAP5-2Q701N4 177 aa7.29□□□□□ -1.24
ROM1-203ENST00000525947 KRTAP4-11Q9BYQ6 195 aa7.28□□□□□ -1.24
ROM1-203ENST00000525947 KRTAP9-6A8MVA2 160 aa7.23□□□□□ -1.25
ROM1-203ENST00000525947 KRTAP9-4Q9BYQ2 154 aa7.18□□□□□ -1.26
ROM1-203ENST00000525947 KRTAP6-2Q3LI66 62 aa7.1□□□□□ -1.27
ROM1-203ENST00000525947 KRTAP5-8O75690 187 aa7.04□□□□□ -1.28
ROM1-203ENST00000525947 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
ROM1-203ENST00000525947 MT3P25713 68 aa6.76□□□□□ -1.33
ROM1-203ENST00000525947 PCP4P48539 62 aa6.73□□□□□ -1.33
ROM1-203ENST00000525947 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
ROM1-203ENST00000525947 MUC5ACP98088 5654 aa6.67□□□□□ -1.34
ROM1-203ENST00000525947 AHNAKQ09666 5890 aaKnown RBP6.66□□□□□ -1.34
ROM1-203ENST00000525947 MUC5BQ9HC84 5762 aaPredicted RBP6.66□□□□□ -1.34
ROM1-203ENST00000525947 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.35
ROM1-203ENST00000525947 LCE1EQ5T753 118 aa6.19□□□□□ -1.42
ROM1-203ENST00000525947 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
ROM1-203ENST00000525947 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
ROM1-203ENST00000525947 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
ROM1-203ENST00000525947 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
ROM1-203ENST00000525947 LCE1CQ5T751 118 aa5.76□□□□□ -1.49
ROM1-203ENST00000525947 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
ROM1-203ENST00000525947 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
ROM1-203ENST00000525947 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
ROM1-203ENST00000525947 KRTAP5-11Q6L8G4 156 aa5.24□□□□□ -1.57
ROM1-203ENST00000525947 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
ROM1-203ENST00000525947 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
ROM1-203ENST00000525947 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
ROM1-203ENST00000525947 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
ROM1-203ENST00000525947 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
ROM1-203ENST00000525947 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
ROM1-203ENST00000525947 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
ROM1-203ENST00000525947 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
ROM1-203ENST00000525947 PHGR1C9JFL3 82 aa4.75□□□□□ -1.65
ROM1-203ENST00000525947 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
ROM1-203ENST00000525947 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
ROM1-203ENST00000525947 PRM1P04553 51 aa3.77□□□□□ -1.81
ROM1-203ENST00000525947 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
ROM1-203ENST00000525947 H3BS24 57 aa3.63□□□□□ -1.83
ROM1-203ENST00000525947 KRTAP21-1Q3LI58 79 aa3.56□□□□□ -1.84
ROM1-203ENST00000525947 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
ROM1-203ENST00000525947 INE1O15225 51 aa3.11□□□□□ -1.91
ROM1-203ENST00000525947 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 194 ms