RNA–Protein interactions for RNA: ENST00000525717.5

UBXN1-206, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-206ENST00000525717 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
UBXN1-206ENST00000525717 TMEM258P61165 79 aa7.3□□□□□ -1.24
UBXN1-206ENST00000525717 UQCR11O14957 56 aa7.29□□□□□ -1.24
UBXN1-206ENST00000525717 MT4P47944 62 aa7.29□□□□□ -1.24
UBXN1-206ENST00000525717 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
UBXN1-206ENST00000525717 PCP4P48539 62 aa7.24□□□□□ -1.25
UBXN1-206ENST00000525717 KRTAP12-3P60328 96 aa7.21□□□□□ -1.26
UBXN1-206ENST00000525717 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
UBXN1-206ENST00000525717 MIR22HGQ0VDD5 57 aa7.15□□□□□ -1.26
UBXN1-206ENST00000525717 HMCN1Q96RW7 5635 aa7.14□□□□□ -1.27
UBXN1-206ENST00000525717 KRTAP5-4Q6L8H1 288 aa7.08□□□□□ -1.28
UBXN1-206ENST00000525717 K7ERS5 55 aa7.05□□□□□ -1.28
UBXN1-206ENST00000525717 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
UBXN1-206ENST00000525717 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
UBXN1-206ENST00000525717 PSPHP1O15172 72 aa7.01□□□□□ -1.29
UBXN1-206ENST00000525717 V9GYY9 64 aa6.93□□□□□ -1.3
UBXN1-206ENST00000525717 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
UBXN1-206ENST00000525717 Q1T7F1 81 aa6.86□□□□□ -1.31
UBXN1-206ENST00000525717 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
UBXN1-206ENST00000525717 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
UBXN1-206ENST00000525717 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
UBXN1-206ENST00000525717 A6NED7 52 aa6.76□□□□□ -1.33
UBXN1-206ENST00000525717 KRTAP20-2Q3LI61 65 aa6.74□□□□□ -1.33
UBXN1-206ENST00000525717 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
UBXN1-206ENST00000525717 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
UBXN1-206ENST00000525717 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
UBXN1-206ENST00000525717 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
UBXN1-206ENST00000525717 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
UBXN1-206ENST00000525717 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
UBXN1-206ENST00000525717 CDC42SE1Q9NRR8 79 aa6.65□□□□□ -1.34
UBXN1-206ENST00000525717 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
UBXN1-206ENST00000525717 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
UBXN1-206ENST00000525717 ROMO1P60602 79 aa6.53□□□□□ -1.36
UBXN1-206ENST00000525717 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
UBXN1-206ENST00000525717 KRTAP5-7Q6L8G8 165 aa6.52□□□□□ -1.37
UBXN1-206ENST00000525717 MT1AP04731 61 aa6.35□□□□□ -1.39
UBXN1-206ENST00000525717 KRTAP6-1Q3LI64 71 aa6.34□□□□□ -1.39
UBXN1-206ENST00000525717 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
UBXN1-206ENST00000525717 KRTAP5-2Q701N4 177 aa6.18□□□□□ -1.42
UBXN1-206ENST00000525717 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
UBXN1-206ENST00000525717 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
UBXN1-206ENST00000525717 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
UBXN1-206ENST00000525717 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
UBXN1-206ENST00000525717 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
UBXN1-206ENST00000525717 MT3P25713 68 aa5.82□□□□□ -1.48
UBXN1-206ENST00000525717 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
UBXN1-206ENST00000525717 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
UBXN1-206ENST00000525717 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
UBXN1-206ENST00000525717 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
UBXN1-206ENST00000525717 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
UBXN1-206ENST00000525717 MUC5BQ9HC84 5762 aaPredicted RBP5.67□□□□□ -1.5
UBXN1-206ENST00000525717 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
UBXN1-206ENST00000525717 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
UBXN1-206ENST00000525717 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
UBXN1-206ENST00000525717 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
UBXN1-206ENST00000525717 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
UBXN1-206ENST00000525717 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
UBXN1-206ENST00000525717 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
UBXN1-206ENST00000525717 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
UBXN1-206ENST00000525717 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
UBXN1-206ENST00000525717 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
UBXN1-206ENST00000525717 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
UBXN1-206ENST00000525717 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
UBXN1-206ENST00000525717 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
UBXN1-206ENST00000525717 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
UBXN1-206ENST00000525717 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
UBXN1-206ENST00000525717 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
UBXN1-206ENST00000525717 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
UBXN1-206ENST00000525717 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
UBXN1-206ENST00000525717 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
UBXN1-206ENST00000525717 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
UBXN1-206ENST00000525717 H3BS24 57 aa3.63□□□□□ -1.83
UBXN1-206ENST00000525717 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
UBXN1-206ENST00000525717 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
UBXN1-206ENST00000525717 INE1O15225 51 aa3.45□□□□□ -1.86
UBXN1-206ENST00000525717 PRM1P04553 51 aa3.36□□□□□ -1.87
UBXN1-206ENST00000525717 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
UBXN1-206ENST00000525717 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 102.5 ms