RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
CCDC90B-203ENST00000525503 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
CCDC90B-203ENST00000525503 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
CCDC90B-203ENST00000525503 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
CCDC90B-203ENST00000525503 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
CCDC90B-203ENST00000525503 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
CCDC90B-203ENST00000525503 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
CCDC90B-203ENST00000525503 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
CCDC90B-203ENST00000525503 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
CCDC90B-203ENST00000525503 MT1GP13640 62 aa5.46□□□□□ -1.54
CCDC90B-203ENST00000525503 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
CCDC90B-203ENST00000525503 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CCDC90B-203ENST00000525503 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
CCDC90B-203ENST00000525503 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CCDC90B-203ENST00000525503 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
CCDC90B-203ENST00000525503 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
CCDC90B-203ENST00000525503 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
CCDC90B-203ENST00000525503 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
CCDC90B-203ENST00000525503 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
CCDC90B-203ENST00000525503 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-203ENST00000525503 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
CCDC90B-203ENST00000525503 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
CCDC90B-203ENST00000525503 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
CCDC90B-203ENST00000525503 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
CCDC90B-203ENST00000525503 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
CCDC90B-203ENST00000525503 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
CCDC90B-203ENST00000525503 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
CCDC90B-203ENST00000525503 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
CCDC90B-203ENST00000525503 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
CCDC90B-203ENST00000525503 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
CCDC90B-203ENST00000525503 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
CCDC90B-203ENST00000525503 MT1AP04731 61 aa4.88□□□□□ -1.63
CCDC90B-203ENST00000525503 SPRR2EP22531 72 aa4.88□□□□□ -1.63
CCDC90B-203ENST00000525503 SPRR2BP35325 72 aa4.88□□□□□ -1.63
CCDC90B-203ENST00000525503 SPRR2AP35326 72 aa4.88□□□□□ -1.63
CCDC90B-203ENST00000525503 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
CCDC90B-203ENST00000525503 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
CCDC90B-203ENST00000525503 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
CCDC90B-203ENST00000525503 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CCDC90B-203ENST00000525503 NEBP20929 6669 aa4.7□□□□□ -1.66
CCDC90B-203ENST00000525503 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CCDC90B-203ENST00000525503 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
CCDC90B-203ENST00000525503 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
CCDC90B-203ENST00000525503 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
CCDC90B-203ENST00000525503 MT3P25713 68 aa4.41□□□□□ -1.7
CCDC90B-203ENST00000525503 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.7
CCDC90B-203ENST00000525503 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
CCDC90B-203ENST00000525503 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
CCDC90B-203ENST00000525503 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
CCDC90B-203ENST00000525503 PRM1P04553 51 aa4.26□□□□□ -1.73
CCDC90B-203ENST00000525503 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
CCDC90B-203ENST00000525503 MT4P47944 62 aa4.07□□□□□ -1.76
CCDC90B-203ENST00000525503 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
CCDC90B-203ENST00000525503 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
CCDC90B-203ENST00000525503 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
CCDC90B-203ENST00000525503 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
CCDC90B-203ENST00000525503 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
CCDC90B-203ENST00000525503 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CCDC90B-203ENST00000525503 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
CCDC90B-203ENST00000525503 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
CCDC90B-203ENST00000525503 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
CCDC90B-203ENST00000525503 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CCDC90B-203ENST00000525503 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
CCDC90B-203ENST00000525503 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CCDC90B-203ENST00000525503 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
CCDC90B-203ENST00000525503 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CCDC90B-203ENST00000525503 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
CCDC90B-203ENST00000525503 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
CCDC90B-203ENST00000525503 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.9
CCDC90B-203ENST00000525503 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
CCDC90B-203ENST00000525503 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
CCDC90B-203ENST00000525503 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
CCDC90B-203ENST00000525503 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
CCDC90B-203ENST00000525503 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
CCDC90B-203ENST00000525503 PHGR1C9JFL3 82 aa2.56□□□□□ -2
CCDC90B-203ENST00000525503 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CCDC90B-203ENST00000525503 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms