RNA–Protein interactions for RNA: ENST00000524883.1

EEF1D-208, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 2

Gene EEF1D, Length 828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-208	ENST00000524883	KRTAP4-9	Q9BYQ8	210 aa		6.47	□□□□□ -1.37
EEF1D-208	ENST00000524883	LCE4A	Q5TA78	99 aa		6.41	□□□□□ -1.38
EEF1D-208	ENST00000524883	LCE1D	Q5T752	114 aa		6.39	□□□□□ -1.39
EEF1D-208	ENST00000524883	KRTAP12-3	P60328	96 aa		6.37	□□□□□ -1.39
EEF1D-208	ENST00000524883	KRTAP4-3	Q9BYR4	195 aa		6.37	□□□□□ -1.39
EEF1D-208	ENST00000524883	KRTAP5-4	Q6L8H1	288 aa		6.34	□□□□□ -1.39
EEF1D-208	ENST00000524883	MIR22HG	Q0VDD5	57 aa		6.33	□□□□□ -1.4
EEF1D-208	ENST00000524883	HMCN1	Q96RW7	5635 aa		6.32	□□□□□ -1.4
EEF1D-208	ENST00000524883	KRTAP25-1	Q3LHN0	102 aa		6.29	□□□□□ -1.4
EEF1D-208	ENST00000524883	GPR98	Q8WXG9	6306 aa		6.28	□□□□□ -1.4
EEF1D-208	ENST00000524883	MT4	P47944	62 aa		6.26	□□□□□ -1.41
EEF1D-208	ENST00000524883		V9GYY9	64 aa		6.25	□□□□□ -1.41
EEF1D-208	ENST00000524883		Q1T7F1	81 aa		6.23	□□□□□ -1.41
EEF1D-208	ENST00000524883	KRTAP4-7	Q9BYR0	210 aa		6.23	□□□□□ -1.41
EEF1D-208	ENST00000524883		K7ERS5	55 aa		6.19	□□□□□ -1.42
EEF1D-208	ENST00000524883	PSPHP1	O15172	72 aa		6.17	□□□□□ -1.42
EEF1D-208	ENST00000524883	RPS28	P62857	69 aa	Known RBP	6.17	□□□□□ -1.42
EEF1D-208	ENST00000524883	SVIP	Q8NHG7	77 aa		6.14	□□□□□ -1.43
EEF1D-208	ENST00000524883	KRTAP4-6	Q9BYQ5	205 aa		6.12	□□□□□ -1.43
EEF1D-208	ENST00000524883	KRTAP23-1	A1A580	65 aa		6.1	□□□□□ -1.43
EEF1D-208	ENST00000524883	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.1	□□□□□ -1.43
EEF1D-208	ENST00000524883	KRTAP19-4	Q3LI73	84 aa		6.09	□□□□□ -1.43
EEF1D-208	ENST00000524883	AHNAK2	Q8IVF2	5795 aa		6.07	□□□□□ -1.44
EEF1D-208	ENST00000524883	KRTAP5-10	Q6L8G5	202 aa		5.98	□□□□□ -1.45
EEF1D-208	ENST00000524883		A6NED7	52 aa		5.97	□□□□□ -1.45
EEF1D-208	ENST00000524883	KRTAP15-1	Q3LI76	137 aa		5.95	□□□□□ -1.46
EEF1D-208	ENST00000524883	KRTAP20-2	Q3LI61	65 aa		5.94	□□□□□ -1.46
EEF1D-208	ENST00000524883	SPRR5	A0A1B0GTR4	108 aa		5.93	□□□□□ -1.46
EEF1D-208	ENST00000524883	LOC100996750	A0A140TA64	210 aa		5.9	□□□□□ -1.46
EEF1D-208	ENST00000524883	CDC42SE1	Q9NRR8	79 aa		5.89	□□□□□ -1.47
EEF1D-208	ENST00000524883	LCE3C	Q5T5A8	94 aa		5.86	□□□□□ -1.47
EEF1D-208	ENST00000524883	KRTAP12-4	P60329	112 aa		5.85	□□□□□ -1.47
EEF1D-208	ENST00000524883	SYNE1	Q8NF91	8797 aa	Known RBP	5.84	□□□□□ -1.47
EEF1D-208	ENST00000524883	KRTAP5-3	Q6L8H2	238 aa		5.81	□□□□□ -1.48
EEF1D-208	ENST00000524883	ROMO1	P60602	79 aa		5.8	□□□□□ -1.48
EEF1D-208	ENST00000524883	KRTAP5-7	Q6L8G8	165 aa		5.75	□□□□□ -1.49
EEF1D-208	ENST00000524883	PRO0628	Q9UI54	55 aa		5.69	□□□□□ -1.5
EEF1D-208	ENST00000524883	MT1A	P04731	61 aa		5.64	□□□□□ -1.51
EEF1D-208	ENST00000524883	KRTAP6-1	Q3LI64	71 aa		5.58	□□□□□ -1.52
EEF1D-208	ENST00000524883	KRTAP9-6	A8MVA2	160 aa		5.57	□□□□□ -1.52
EEF1D-208	ENST00000524883	KRTAP5-2	Q701N4	177 aa		5.57	□□□□□ -1.52
EEF1D-208	ENST00000524883	BRK1	Q8WUW1	75 aa		5.55	□□□□□ -1.52
EEF1D-208	ENST00000524883	KRTAP9-4	Q9BYQ2	154 aa		5.42	□□□□□ -1.54
EEF1D-208	ENST00000524883	KRTAP4-11	Q9BYQ6	195 aa		5.41	□□□□□ -1.54
EEF1D-208	ENST00000524883	PMAIP1	Q13794	54 aa		5.31	□□□□□ -1.56
EEF1D-208	ENST00000524883	KRTAP6-2	Q3LI66	62 aa		5.31	□□□□□ -1.56
EEF1D-208	ENST00000524883	KRTAP5-8	O75690	187 aa		5.25	□□□□□ -1.57
EEF1D-208	ENST00000524883	KTN1-AS1	Q86SY8	53 aa		5.22	□□□□□ -1.57
EEF1D-208	ENST00000524883	MT3	P25713	68 aa		5.12	□□□□□ -1.59
EEF1D-208	ENST00000524883	OBSCN	Q5VST9	7968 aa		5.11	□□□□□ -1.59
EEF1D-208	ENST00000524883	MUC5B	Q9HC84	5762 aa	Predicted RBP	5	□□□□□ -1.61
EEF1D-208	ENST00000524883	KRTAP5-1	Q6L8H4	278 aa		4.97	□□□□□ -1.61
EEF1D-208	ENST00000524883	MUC5AC	P98088	5654 aa		4.96	□□□□□ -1.61
EEF1D-208	ENST00000524883	KRTAP9-9	Q9BYP9	154 aa		4.92	□□□□□ -1.62
EEF1D-208	ENST00000524883	AHNAK	Q09666	5890 aa	Known RBP	4.91	□□□□□ -1.62
EEF1D-208	ENST00000524883	PRAC1	Q96KF2	57 aa		4.87	□□□□□ -1.63
EEF1D-208	ENST00000524883	LCE1E	Q5T753	118 aa		4.76	□□□□□ -1.65
EEF1D-208	ENST00000524883	KRTAP4-2	Q9BYR5	136 aa		4.5	□□□□□ -1.69
EEF1D-208	ENST00000524883	LCE1C	Q5T751	118 aa		4.41	□□□□□ -1.7
EEF1D-208	ENST00000524883	LCE1B	Q5T7P3	118 aa		4.41	□□□□□ -1.7
EEF1D-208	ENST00000524883		H3BS24	57 aa		4.22	□□□□□ -1.73
EEF1D-208	ENST00000524883	LCE3D	Q9BYE3	92 aa		4.21	□□□□□ -1.74
EEF1D-208	ENST00000524883	LUZP6	Q538Z0	58 aa		4.17	□□□□□ -1.74
EEF1D-208	ENST00000524883	NDUFAF8	A1L188	74 aa		4.06	□□□□□ -1.76
EEF1D-208	ENST00000524883	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.06	□□□□□ -1.76
EEF1D-208	ENST00000524883	KRTAP5-11	Q6L8G4	156 aa		4.03	□□□□□ -1.76
EEF1D-208	ENST00000524883	KRTAP4-12	Q9BQ66	201 aa		3.97	□□□□□ -1.77
EEF1D-208	ENST00000524883	LCE3E	Q5T5B0	92 aa		3.96	□□□□□ -1.78
EEF1D-208	ENST00000524883	LCE1F	Q5T754	118 aa		3.9	□□□□□ -1.79
EEF1D-208	ENST00000524883		A0A0A0MQY5	61 aa		3.8	□□□□□ -1.8
EEF1D-208	ENST00000524883	KRTAP21-2	Q3LI59	83 aa		3.71	□□□□□ -1.82
EEF1D-208	ENST00000524883	INE1	O15225	51 aa		3.5	□□□□□ -1.85
EEF1D-208	ENST00000524883	PHGR1	C9JFL3	82 aa		3.45	□□□□□ -1.86
EEF1D-208	ENST00000524883	KRTAP4-4	Q9BYR3	166 aa		3.3	□□□□□ -1.88
EEF1D-208	ENST00000524883	MUC19	Q7Z5P9	8384 aa		3.17	□□□□□ -1.9
EEF1D-208	ENST00000524883	PRM1	P04553	51 aa		2.96	□□□□□ -1.94
EEF1D-208	ENST00000524883	KRTAP21-1	Q3LI58	79 aa		2.63	□□□□□ -1.99
EEF1D-208	ENST00000524883	MUC16	Q8WXI7	14507 aa		2.3	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 165.7 ms