RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
TM9SF1-203ENST00000524835 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
TM9SF1-203ENST00000524835 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
TM9SF1-203ENST00000524835 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
TM9SF1-203ENST00000524835 MT1GP13640 62 aa6.57□□□□□ -1.36
TM9SF1-203ENST00000524835 MT1MQ8N339 61 aa6.54□□□□□ -1.36
TM9SF1-203ENST00000524835 KRTAP5-9P26371 169 aa6.5□□□□□ -1.37
TM9SF1-203ENST00000524835 LCE5AQ5TCM9 118 aa6.5□□□□□ -1.37
TM9SF1-203ENST00000524835 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.37
TM9SF1-203ENST00000524835 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
TM9SF1-203ENST00000524835 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
TM9SF1-203ENST00000524835 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
TM9SF1-203ENST00000524835 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
TM9SF1-203ENST00000524835 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
TM9SF1-203ENST00000524835 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
TM9SF1-203ENST00000524835 SPRR2EP22531 72 aa6.23□□□□□ -1.41
TM9SF1-203ENST00000524835 SPRR2BP35325 72 aa6.23□□□□□ -1.41
TM9SF1-203ENST00000524835 SPRR2AP35326 72 aa6.23□□□□□ -1.41
TM9SF1-203ENST00000524835 DSTQ03001 7570 aaKnown RBP6.22□□□□□ -1.41
TM9SF1-203ENST00000524835 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
TM9SF1-203ENST00000524835 KRTAP2-3P0C7H8 128 aa6.16□□□□□ -1.42
TM9SF1-203ENST00000524835 KRTAP2-4Q9BYR9 128 aa6.16□□□□□ -1.42
TM9SF1-203ENST00000524835 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
TM9SF1-203ENST00000524835 SPRR2DP22532 72 aa5.99□□□□□ -1.45
TM9SF1-203ENST00000524835 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
TM9SF1-203ENST00000524835 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
TM9SF1-203ENST00000524835 NEBP20929 6669 aa5.88□□□□□ -1.47
TM9SF1-203ENST00000524835 MT1AP04731 61 aa5.8□□□□□ -1.48
TM9SF1-203ENST00000524835 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
TM9SF1-203ENST00000524835 INE1O15225 51 aa5.75□□□□□ -1.49
TM9SF1-203ENST00000524835 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
TM9SF1-203ENST00000524835 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
TM9SF1-203ENST00000524835 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
TM9SF1-203ENST00000524835 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
TM9SF1-203ENST00000524835 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
TM9SF1-203ENST00000524835 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
TM9SF1-203ENST00000524835 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
TM9SF1-203ENST00000524835 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
TM9SF1-203ENST00000524835 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
TM9SF1-203ENST00000524835 MT3P25713 68 aa5.23□□□□□ -1.57
TM9SF1-203ENST00000524835 KRTAP20-1Q3LI63 56 aa5.23□□□□□ -1.57
TM9SF1-203ENST00000524835 KRTAP4-6Q9BYQ5 205 aa5.23□□□□□ -1.57
TM9SF1-203ENST00000524835 MT4P47944 62 aa5.22□□□□□ -1.57
TM9SF1-203ENST00000524835 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
TM9SF1-203ENST00000524835 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
TM9SF1-203ENST00000524835 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
TM9SF1-203ENST00000524835 LCE1DQ5T752 114 aa5.09□□□□□ -1.6
TM9SF1-203ENST00000524835 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
TM9SF1-203ENST00000524835 KRTAP5-2Q701N4 177 aa5.03□□□□□ -1.6
TM9SF1-203ENST00000524835 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
TM9SF1-203ENST00000524835 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
TM9SF1-203ENST00000524835 PRM1P04553 51 aa4.56□□□□□ -1.68
TM9SF1-203ENST00000524835 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
TM9SF1-203ENST00000524835 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
TM9SF1-203ENST00000524835 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
TM9SF1-203ENST00000524835 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
TM9SF1-203ENST00000524835 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
TM9SF1-203ENST00000524835 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
TM9SF1-203ENST00000524835 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TM9SF1-203ENST00000524835 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
TM9SF1-203ENST00000524835 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
TM9SF1-203ENST00000524835 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
TM9SF1-203ENST00000524835 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
TM9SF1-203ENST00000524835 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
TM9SF1-203ENST00000524835 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
TM9SF1-203ENST00000524835 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
TM9SF1-203ENST00000524835 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
TM9SF1-203ENST00000524835 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
TM9SF1-203ENST00000524835 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
TM9SF1-203ENST00000524835 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
TM9SF1-203ENST00000524835 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
TM9SF1-203ENST00000524835 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
TM9SF1-203ENST00000524835 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
TM9SF1-203ENST00000524835 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
TM9SF1-203ENST00000524835 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
TM9SF1-203ENST00000524835 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
TM9SF1-203ENST00000524835 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 90.3 ms