RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
LIN7C-202ENST00000524596 LPAP08519 4548 aa2.04□□□□□ -2.08
LIN7C-202ENST00000524596 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
LIN7C-202ENST00000524596 LCE3BQ5TA77 95 aa2.03□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.09
LIN7C-202ENST00000524596 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP4-7Q9BYR0 210 aa2□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP4-8A0A0G2JLE6 195 aa2□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
LIN7C-202ENST00000524596 MT1HP80294 61 aa1.99□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
LIN7C-202ENST00000524596 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP9-8Q9BYQ0 159 aa1.97□□□□□ -2.09
LIN7C-202ENST00000524596 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
LIN7C-202ENST00000524596 NEBP20929 6669 aa1.96□□□□□ -2.1
LIN7C-202ENST00000524596 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
LIN7C-202ENST00000524596 USH2AO75445 5202 aa1.95□□□□□ -2.1
LIN7C-202ENST00000524596 KRTAP19-1Q8IUB9 90 aa1.94□□□□□ -2.1
LIN7C-202ENST00000524596 MT1AP04731 61 aa1.92□□□□□ -2.1
LIN7C-202ENST00000524596 MT1LQ93083 61 aa1.92□□□□□ -2.1
LIN7C-202ENST00000524596 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
LIN7C-202ENST00000524596 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
LIN7C-202ENST00000524596 SPRR2AP35326 72 aa1.91□□□□□ -2.1
LIN7C-202ENST00000524596 KRTAP9-3Q9BYQ3 159 aa1.91□□□□□ -2.1
LIN7C-202ENST00000524596 SPRR2BP35325 72 aa1.91□□□□□ -2.1
LIN7C-202ENST00000524596 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
LIN7C-202ENST00000524596 SPRR2DP22532 72 aa1.9□□□□□ -2.11
LIN7C-202ENST00000524596 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.11
LIN7C-202ENST00000524596 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
LIN7C-202ENST00000524596 MT1XP80297 61 aa1.89□□□□□ -2.11
LIN7C-202ENST00000524596 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
LIN7C-202ENST00000524596 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
LIN7C-202ENST00000524596 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
LIN7C-202ENST00000524596 MT1GP13640 62 aa1.86□□□□□ -2.11
LIN7C-202ENST00000524596 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
LIN7C-202ENST00000524596 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
LIN7C-202ENST00000524596 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
LIN7C-202ENST00000524596 MT2AP02795 61 aa1.84□□□□□ -2.11
LIN7C-202ENST00000524596 MT1EP04732 61 aa1.84□□□□□ -2.12
LIN7C-202ENST00000524596 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
LIN7C-202ENST00000524596 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
LIN7C-202ENST00000524596 MT1FP04733 61 aa1.82□□□□□ -2.12
LIN7C-202ENST00000524596 KRTAP5-9P26371 169 aa1.8□□□□□ -2.12
LIN7C-202ENST00000524596 SPRR2EP22531 72 aa1.77□□□□□ -2.13
LIN7C-202ENST00000524596 MT1BP07438 61 aa1.73□□□□□ -2.13
LIN7C-202ENST00000524596 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
LIN7C-202ENST00000524596 KRTAP19-3Q7Z4W3 81 aa1.68□□□□□ -2.14
LIN7C-202ENST00000524596 KRTAP4-11Q9BYQ6 195 aa1.67□□□□□ -2.14
LIN7C-202ENST00000524596 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
LIN7C-202ENST00000524596 KMT2DO14686 5537 aa1.66□□□□□ -2.14
LIN7C-202ENST00000524596 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.15
LIN7C-202ENST00000524596 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
LIN7C-202ENST00000524596 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
LIN7C-202ENST00000524596 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
LIN7C-202ENST00000524596 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
LIN7C-202ENST00000524596 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
LIN7C-202ENST00000524596 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
LIN7C-202ENST00000524596 MT1MQ8N339 61 aa1.58□□□□□ -2.16
LIN7C-202ENST00000524596 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
LIN7C-202ENST00000524596 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
LIN7C-202ENST00000524596 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
LIN7C-202ENST00000524596 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
LIN7C-202ENST00000524596 KRTAP4-3Q9BYR4 195 aa1.49□□□□□ -2.17
LIN7C-202ENST00000524596 KRTAP5-4Q6L8H1 288 aa1.48□□□□□ -2.17
LIN7C-202ENST00000524596 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
LIN7C-202ENST00000524596 MT4P47944 62 aa1.37□□□□□ -2.19
LIN7C-202ENST00000524596 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
LIN7C-202ENST00000524596 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
LIN7C-202ENST00000524596 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
LIN7C-202ENST00000524596 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
LIN7C-202ENST00000524596 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
LIN7C-202ENST00000524596 KRTAP5-8O75690 187 aa1.22□□□□□ -2.21
LIN7C-202ENST00000524596 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
LIN7C-202ENST00000524596 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
LIN7C-202ENST00000524596 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
LIN7C-202ENST00000524596 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms