RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
CSTF3-204ENST00000524556 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
CSTF3-204ENST00000524556 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
CSTF3-204ENST00000524556 SNURFQ9Y675 71 aa4.92□□□□□ -1.62
CSTF3-204ENST00000524556 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
CSTF3-204ENST00000524556 COX7CP15954 63 aa4.9□□□□□ -1.63
CSTF3-204ENST00000524556 SERP1Q9Y6X1 66 aa4.9□□□□□ -1.63
CSTF3-204ENST00000524556 SEC61GP60059 68 aa4.89□□□□□ -1.63
CSTF3-204ENST00000524556 SERP2Q8N6R1 65 aa4.89□□□□□ -1.63
CSTF3-204ENST00000524556 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
CSTF3-204ENST00000524556 A0A1B0GU33 70 aa4.86□□□□□ -1.63
CSTF3-204ENST00000524556 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
CSTF3-204ENST00000524556 TNP1P09430 55 aa4.83□□□□□ -1.64
CSTF3-204ENST00000524556 COA5Q86WW8 74 aa4.81□□□□□ -1.64
CSTF3-204ENST00000524556 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
CSTF3-204ENST00000524556 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CSTF3-204ENST00000524556 TMEM258P61165 79 aa4.75□□□□□ -1.65
CSTF3-204ENST00000524556 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
CSTF3-204ENST00000524556 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
CSTF3-204ENST00000524556 A8MU10 97 aa4.69□□□□□ -1.66
CSTF3-204ENST00000524556 H7BZZ5 65 aa4.69□□□□□ -1.66
CSTF3-204ENST00000524556 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
CSTF3-204ENST00000524556 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
CSTF3-204ENST00000524556 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
CSTF3-204ENST00000524556 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
CSTF3-204ENST00000524556 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
CSTF3-204ENST00000524556 A0A1B0GU69 56 aa4.57□□□□□ -1.68
CSTF3-204ENST00000524556 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
CSTF3-204ENST00000524556 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
CSTF3-204ENST00000524556 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
CSTF3-204ENST00000524556 MT1AP04731 61 aa4.41□□□□□ -1.7
CSTF3-204ENST00000524556 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CSTF3-204ENST00000524556 Q1T7F1 81 aa4.39□□□□□ -1.71
CSTF3-204ENST00000524556 V9GYY9 64 aa4.38□□□□□ -1.71
CSTF3-204ENST00000524556 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
CSTF3-204ENST00000524556 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
CSTF3-204ENST00000524556 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
CSTF3-204ENST00000524556 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CSTF3-204ENST00000524556 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
CSTF3-204ENST00000524556 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
CSTF3-204ENST00000524556 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
CSTF3-204ENST00000524556 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
CSTF3-204ENST00000524556 PSPHP1O15172 72 aa4.26□□□□□ -1.73
CSTF3-204ENST00000524556 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
CSTF3-204ENST00000524556 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
CSTF3-204ENST00000524556 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
CSTF3-204ENST00000524556 UQCR11O14957 56 aa4.15□□□□□ -1.75
CSTF3-204ENST00000524556 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
CSTF3-204ENST00000524556 A6NED7 52 aa4.14□□□□□ -1.75
CSTF3-204ENST00000524556 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
CSTF3-204ENST00000524556 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
CSTF3-204ENST00000524556 MT3P25713 68 aa4.05□□□□□ -1.76
CSTF3-204ENST00000524556 K7ERS5 55 aa4.02□□□□□ -1.77
CSTF3-204ENST00000524556 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
CSTF3-204ENST00000524556 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CSTF3-204ENST00000524556 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CSTF3-204ENST00000524556 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CSTF3-204ENST00000524556 H3BS24 57 aa3.81□□□□□ -1.8
CSTF3-204ENST00000524556 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
CSTF3-204ENST00000524556 ROMO1P60602 79 aa3.68□□□□□ -1.82
CSTF3-204ENST00000524556 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
CSTF3-204ENST00000524556 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CSTF3-204ENST00000524556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CSTF3-204ENST00000524556 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
CSTF3-204ENST00000524556 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CSTF3-204ENST00000524556 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CSTF3-204ENST00000524556 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
CSTF3-204ENST00000524556 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
CSTF3-204ENST00000524556 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
CSTF3-204ENST00000524556 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CSTF3-204ENST00000524556 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CSTF3-204ENST00000524556 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CSTF3-204ENST00000524556 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
CSTF3-204ENST00000524556 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CSTF3-204ENST00000524556 INE1O15225 51 aa2.57□□□□□ -2
CSTF3-204ENST00000524556 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
CSTF3-204ENST00000524556 PRM1P04553 51 aa1.91□□□□□ -2.1
CSTF3-204ENST00000524556 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 131.6 ms