RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
CLN8-207ENST00000524258 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
CLN8-207ENST00000524258 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
CLN8-207ENST00000524258 MT1LQ93083 61 aa4.29□□□□□ -1.72
CLN8-207ENST00000524258 MT1GP13640 62 aa4.28□□□□□ -1.72
CLN8-207ENST00000524258 MT1MQ8N339 61 aa4.23□□□□□ -1.73
CLN8-207ENST00000524258 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
CLN8-207ENST00000524258 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
CLN8-207ENST00000524258 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
CLN8-207ENST00000524258 A6NED7 52 aa4.21□□□□□ -1.74
CLN8-207ENST00000524258 K7ERS5 55 aa4.19□□□□□ -1.74
CLN8-207ENST00000524258 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
CLN8-207ENST00000524258 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
CLN8-207ENST00000524258 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
CLN8-207ENST00000524258 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
CLN8-207ENST00000524258 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CLN8-207ENST00000524258 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
CLN8-207ENST00000524258 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
CLN8-207ENST00000524258 ROMO1P60602 79 aa4.02□□□□□ -1.77
CLN8-207ENST00000524258 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
CLN8-207ENST00000524258 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
CLN8-207ENST00000524258 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
CLN8-207ENST00000524258 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
CLN8-207ENST00000524258 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
CLN8-207ENST00000524258 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
CLN8-207ENST00000524258 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CLN8-207ENST00000524258 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
CLN8-207ENST00000524258 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CLN8-207ENST00000524258 MT4P47944 62 aa3.87□□□□□ -1.79
CLN8-207ENST00000524258 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
CLN8-207ENST00000524258 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
CLN8-207ENST00000524258 H3BS24 57 aa3.81□□□□□ -1.8
CLN8-207ENST00000524258 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
CLN8-207ENST00000524258 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
CLN8-207ENST00000524258 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
CLN8-207ENST00000524258 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
CLN8-207ENST00000524258 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
CLN8-207ENST00000524258 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
CLN8-207ENST00000524258 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
CLN8-207ENST00000524258 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
CLN8-207ENST00000524258 MT1AP04731 61 aa3.64□□□□□ -1.83
CLN8-207ENST00000524258 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
CLN8-207ENST00000524258 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
CLN8-207ENST00000524258 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
CLN8-207ENST00000524258 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
CLN8-207ENST00000524258 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
CLN8-207ENST00000524258 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CLN8-207ENST00000524258 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
CLN8-207ENST00000524258 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CLN8-207ENST00000524258 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
CLN8-207ENST00000524258 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
CLN8-207ENST00000524258 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
CLN8-207ENST00000524258 MT3P25713 68 aa3.29□□□□□ -1.88
CLN8-207ENST00000524258 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
CLN8-207ENST00000524258 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
CLN8-207ENST00000524258 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CLN8-207ENST00000524258 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CLN8-207ENST00000524258 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
CLN8-207ENST00000524258 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
CLN8-207ENST00000524258 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CLN8-207ENST00000524258 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
CLN8-207ENST00000524258 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
CLN8-207ENST00000524258 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CLN8-207ENST00000524258 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CLN8-207ENST00000524258 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
CLN8-207ENST00000524258 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
CLN8-207ENST00000524258 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CLN8-207ENST00000524258 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
CLN8-207ENST00000524258 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
CLN8-207ENST00000524258 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
CLN8-207ENST00000524258 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
CLN8-207ENST00000524258 INE1O15225 51 aa2.3□□□□□ -2.04
CLN8-207ENST00000524258 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CLN8-207ENST00000524258 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
CLN8-207ENST00000524258 PRM1P04553 51 aa2.07□□□□□ -2.08
CLN8-207ENST00000524258 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CLN8-207ENST00000524258 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CLN8-207ENST00000524258 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 71.7 ms