RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-256	ENST00000524257	PP632	Q6XCG6	107 aa		3.8	□□□□□ -1.8
PTK2-256	ENST00000524257	MT1L	Q93083	61 aa		3.8	□□□□□ -1.8
PTK2-256	ENST00000524257		V9GYY9	64 aa		3.79	□□□□□ -1.8
PTK2-256	ENST00000524257	LOC100996750	A0A140TA64	210 aa		3.77	□□□□□ -1.81
PTK2-256	ENST00000524257	MIR22HG	Q0VDD5	57 aa		3.77	□□□□□ -1.81
PTK2-256	ENST00000524257	MT1M	Q8N339	61 aa		3.77	□□□□□ -1.81
PTK2-256	ENST00000524257	KRTAP4-6	Q9BYQ5	205 aa		3.77	□□□□□ -1.81
PTK2-256	ENST00000524257	PSPHP1	O15172	72 aa		3.71	□□□□□ -1.82
PTK2-256	ENST00000524257	KRTAP4-9	Q9BYQ8	210 aa		3.71	□□□□□ -1.82
PTK2-256	ENST00000524257		K7ERS5	55 aa		3.69	□□□□□ -1.82
PTK2-256	ENST00000524257	KRTAP12-3	P60328	96 aa		3.69	□□□□□ -1.82
PTK2-256	ENST00000524257	KRTAP4-3	Q9BYR4	195 aa		3.69	□□□□□ -1.82
PTK2-256	ENST00000524257	KRTAP25-1	Q3LHN0	102 aa		3.67	□□□□□ -1.82
PTK2-256	ENST00000524257	LCE1D	Q5T752	114 aa		3.63	□□□□□ -1.83
PTK2-256	ENST00000524257	LCE4A	Q5TA78	99 aa		3.63	□□□□□ -1.83
PTK2-256	ENST00000524257	KRTAP4-7	Q9BYR0	210 aa		3.62	□□□□□ -1.83
PTK2-256	ENST00000524257	PRO0628	Q9UI54	55 aa		3.62	□□□□□ -1.83
PTK2-256	ENST00000524257		A6NED7	52 aa		3.59	□□□□□ -1.83
PTK2-256	ENST00000524257	MT4	P47944	62 aa		3.59	□□□□□ -1.83
PTK2-256	ENST00000524257	KRTAP5-4	Q6L8H1	288 aa		3.56	□□□□□ -1.84
PTK2-256	ENST00000524257	HMCN1	Q96RW7	5635 aa		3.56	□□□□□ -1.84
PTK2-256	ENST00000524257	BRK1	Q8WUW1	75 aa		3.55	□□□□□ -1.84
PTK2-256	ENST00000524257	GPR98	Q8WXG9	6306 aa		3.54	□□□□□ -1.84
PTK2-256	ENST00000524257	KRTAP23-1	A1A580	65 aa		3.52	□□□□□ -1.85
PTK2-256	ENST00000524257	CDC42SE1	Q9NRR8	79 aa		3.51	□□□□□ -1.85
PTK2-256	ENST00000524257	KRTAP19-4	Q3LI73	84 aa		3.46	□□□□□ -1.86
PTK2-256	ENST00000524257	KRTAP15-1	Q3LI76	137 aa		3.46	□□□□□ -1.86
PTK2-256	ENST00000524257	AHNAK2	Q8IVF2	5795 aa		3.45	□□□□□ -1.86
PTK2-256	ENST00000524257	ROMO1	P60602	79 aa		3.44	□□□□□ -1.86
PTK2-256	ENST00000524257	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.44	□□□□□ -1.86
PTK2-256	ENST00000524257	LCE3C	Q5T5A8	94 aa		3.4	□□□□□ -1.87
PTK2-256	ENST00000524257	PMAIP1	Q13794	54 aa		3.37	□□□□□ -1.87
PTK2-256	ENST00000524257	KRTAP20-2	Q3LI61	65 aa		3.37	□□□□□ -1.87
PTK2-256	ENST00000524257	KRTAP12-4	P60329	112 aa		3.36	□□□□□ -1.87
PTK2-256	ENST00000524257	SPRR5	A0A1B0GTR4	108 aa		3.35	□□□□□ -1.87
PTK2-256	ENST00000524257	KRTAP5-10	Q6L8G5	202 aa		3.34	□□□□□ -1.87
PTK2-256	ENST00000524257	KTN1-AS1	Q86SY8	53 aa		3.32	□□□□□ -1.88
PTK2-256	ENST00000524257	SYNE1	Q8NF91	8797 aa	Known RBP	3.29	□□□□□ -1.88
PTK2-256	ENST00000524257	KRTAP5-3	Q6L8H2	238 aa		3.28	□□□□□ -1.88
PTK2-256	ENST00000524257	MT1A	P04731	61 aa		3.23	□□□□□ -1.89
PTK2-256	ENST00000524257	KRTAP9-6	A8MVA2	160 aa		3.21	□□□□□ -1.9
PTK2-256	ENST00000524257	KRTAP6-1	Q3LI64	71 aa		3.21	□□□□□ -1.9
PTK2-256	ENST00000524257	KRTAP5-7	Q6L8G8	165 aa		3.21	□□□□□ -1.9
PTK2-256	ENST00000524257	KRTAP5-2	Q701N4	177 aa		3.13	□□□□□ -1.91
PTK2-256	ENST00000524257	KRTAP9-4	Q9BYQ2	154 aa		3.11	□□□□□ -1.91
PTK2-256	ENST00000524257	PRAC1	Q96KF2	57 aa		3.09	□□□□□ -1.91
PTK2-256	ENST00000524257	KRTAP9-9	Q9BYP9	154 aa		3.09	□□□□□ -1.91
PTK2-256	ENST00000524257	KRTAP6-2	Q3LI66	62 aa		3.06	□□□□□ -1.92
PTK2-256	ENST00000524257	KRTAP4-11	Q9BYQ6	195 aa		3.06	□□□□□ -1.92
PTK2-256	ENST00000524257	KRTAP4-12	Q9BQ66	201 aa		3.05	□□□□□ -1.92
PTK2-256	ENST00000524257	KRTAP5-8	O75690	187 aa		2.96	□□□□□ -1.94
PTK2-256	ENST00000524257	MT3	P25713	68 aa		2.95	□□□□□ -1.94
PTK2-256	ENST00000524257	OBSCN	Q5VST9	7968 aa		2.92	□□□□□ -1.94
PTK2-256	ENST00000524257	KRTAP4-2	Q9BYR5	136 aa		2.91	□□□□□ -1.94
PTK2-256	ENST00000524257	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.82	□□□□□ -1.96
PTK2-256	ENST00000524257	KRTAP5-1	Q6L8H4	278 aa		2.81	□□□□□ -1.96
PTK2-256	ENST00000524257	AHNAK	Q09666	5890 aa	Known RBP	2.81	□□□□□ -1.96
PTK2-256	ENST00000524257	MUC5AC	P98088	5654 aa		2.8	□□□□□ -1.96
PTK2-256	ENST00000524257	LCE1E	Q5T753	118 aa		2.69	□□□□□ -1.98
PTK2-256	ENST00000524257		H3BS24	57 aa		2.68	□□□□□ -1.98
PTK2-256	ENST00000524257	NDUFAF8	A1L188	74 aa		2.6	□□□□□ -1.99
PTK2-256	ENST00000524257	LUZP6	Q538Z0	58 aa		2.55	□□□□□ -2
PTK2-256	ENST00000524257	LCE1B	Q5T7P3	118 aa		2.55	□□□□□ -2
PTK2-256	ENST00000524257	LCE1C	Q5T751	118 aa		2.5	□□□□□ -2.01
PTK2-256	ENST00000524257	LCE3D	Q9BYE3	92 aa		2.46	□□□□□ -2.02
PTK2-256	ENST00000524257		A0A0A0MQY5	61 aa		2.4	□□□□□ -2.03
PTK2-256	ENST00000524257	LCE3E	Q5T5B0	92 aa		2.32	□□□□□ -2.04
PTK2-256	ENST00000524257	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.28	□□□□□ -2.04
PTK2-256	ENST00000524257	KRTAP5-11	Q6L8G4	156 aa		2.26	□□□□□ -2.05
PTK2-256	ENST00000524257	INE1	O15225	51 aa		2.22	□□□□□ -2.05
PTK2-256	ENST00000524257	LCE1F	Q5T754	118 aa		2.19	□□□□□ -2.06
PTK2-256	ENST00000524257	KRTAP21-2	Q3LI59	83 aa		2.11	□□□□□ -2.07
PTK2-256	ENST00000524257	PHGR1	C9JFL3	82 aa		1.95	□□□□□ -2.1
PTK2-256	ENST00000524257	KRTAP4-4	Q9BYR3	166 aa		1.94	□□□□□ -2.1
PTK2-256	ENST00000524257	MUC19	Q7Z5P9	8384 aa		1.81	□□□□□ -2.12
PTK2-256	ENST00000524257	PRM1	P04553	51 aa		1.76	□□□□□ -2.13
PTK2-256	ENST00000524257	KRTAP21-1	Q3LI58	79 aa		1.48	□□□□□ -2.17
PTK2-256	ENST00000524257	MUC16	Q8WXI7	14507 aa		1.34	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 116.7 ms