RNA–Protein interactions for RNA: ENST00000524215.5

RUNX1T1-247, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-247ENST00000524215 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
RUNX1T1-247ENST00000524215 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
RUNX1T1-247ENST00000524215 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
RUNX1T1-247ENST00000524215 MT1EP04732 61 aa3.42□□□□□ -1.86
RUNX1T1-247ENST00000524215 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
RUNX1T1-247ENST00000524215 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
RUNX1T1-247ENST00000524215 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
RUNX1T1-247ENST00000524215 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
RUNX1T1-247ENST00000524215 TNP1P09430 55 aa3.37□□□□□ -1.87
RUNX1T1-247ENST00000524215 A8MU10 97 aa3.36□□□□□ -1.87
RUNX1T1-247ENST00000524215 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
RUNX1T1-247ENST00000524215 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
RUNX1T1-247ENST00000524215 MT1GP13640 62 aa3.34□□□□□ -1.87
RUNX1T1-247ENST00000524215 CCDC179H3BU77 68 aa3.33□□□□□ -1.88
RUNX1T1-247ENST00000524215 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
RUNX1T1-247ENST00000524215 LINC01558Q9Y6Z2 57 aa3.3□□□□□ -1.88
RUNX1T1-247ENST00000524215 UQCR11O14957 56 aa3.29□□□□□ -1.88
RUNX1T1-247ENST00000524215 TMEM258P61165 79 aa3.29□□□□□ -1.88
RUNX1T1-247ENST00000524215 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
RUNX1T1-247ENST00000524215 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
RUNX1T1-247ENST00000524215 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
RUNX1T1-247ENST00000524215 MT1MQ8N339 61 aa3.26□□□□□ -1.89
RUNX1T1-247ENST00000524215 MT1LQ93083 61 aa3.26□□□□□ -1.89
RUNX1T1-247ENST00000524215 K7ERS5 55 aa3.23□□□□□ -1.89
RUNX1T1-247ENST00000524215 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
RUNX1T1-247ENST00000524215 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
RUNX1T1-247ENST00000524215 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
RUNX1T1-247ENST00000524215 MIR22HGQ0VDD5 57 aa3.19□□□□□ -1.9
RUNX1T1-247ENST00000524215 KRTAP4-7Q9BYR0 210 aa3.19□□□□□ -1.9
RUNX1T1-247ENST00000524215 KRTAP25-1Q3LHN0 102 aa3.17□□□□□ -1.9
RUNX1T1-247ENST00000524215 V9GYY9 64 aa3.17□□□□□ -1.9
RUNX1T1-247ENST00000524215 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
RUNX1T1-247ENST00000524215 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
RUNX1T1-247ENST00000524215 PSPHP1O15172 72 aa3.08□□□□□ -1.92
RUNX1T1-247ENST00000524215 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
RUNX1T1-247ENST00000524215 Q1T7F1 81 aa3.06□□□□□ -1.92
RUNX1T1-247ENST00000524215 A6NED7 52 aa3.03□□□□□ -1.92
RUNX1T1-247ENST00000524215 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
RUNX1T1-247ENST00000524215 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
RUNX1T1-247ENST00000524215 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
RUNX1T1-247ENST00000524215 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
RUNX1T1-247ENST00000524215 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
RUNX1T1-247ENST00000524215 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
RUNX1T1-247ENST00000524215 ROMO1P60602 79 aa2.92□□□□□ -1.94
RUNX1T1-247ENST00000524215 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
RUNX1T1-247ENST00000524215 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
RUNX1T1-247ENST00000524215 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
RUNX1T1-247ENST00000524215 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
RUNX1T1-247ENST00000524215 MT1AP04731 61 aa2.79□□□□□ -1.96
RUNX1T1-247ENST00000524215 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
RUNX1T1-247ENST00000524215 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
RUNX1T1-247ENST00000524215 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
RUNX1T1-247ENST00000524215 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
RUNX1T1-247ENST00000524215 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
RUNX1T1-247ENST00000524215 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
RUNX1T1-247ENST00000524215 MT3P25713 68 aa2.61□□□□□ -1.99
RUNX1T1-247ENST00000524215 BRK1Q8WUW1 75 aa2.58□□□□□ -2
RUNX1T1-247ENST00000524215 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
RUNX1T1-247ENST00000524215 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
RUNX1T1-247ENST00000524215 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
RUNX1T1-247ENST00000524215 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
RUNX1T1-247ENST00000524215 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
RUNX1T1-247ENST00000524215 KTN1-AS1Q86SY8 53 aa2.34□□□□□ -2.03
RUNX1T1-247ENST00000524215 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
RUNX1T1-247ENST00000524215 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
RUNX1T1-247ENST00000524215 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
RUNX1T1-247ENST00000524215 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
RUNX1T1-247ENST00000524215 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
RUNX1T1-247ENST00000524215 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
RUNX1T1-247ENST00000524215 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
RUNX1T1-247ENST00000524215 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
RUNX1T1-247ENST00000524215 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
RUNX1T1-247ENST00000524215 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
RUNX1T1-247ENST00000524215 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
RUNX1T1-247ENST00000524215 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
RUNX1T1-247ENST00000524215 INE1O15225 51 aa1.53□□□□□ -2.16
RUNX1T1-247ENST00000524215 PRM1P04553 51 aa1.46□□□□□ -2.18
RUNX1T1-247ENST00000524215 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 54.8 ms