RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 SEC61GP60059 68 aa4.06□□□□□ -1.76
CCNC-218ENST00000524049 MT1LQ93083 61 aa4.06□□□□□ -1.76
CCNC-218ENST00000524049 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
CCNC-218ENST00000524049 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
CCNC-218ENST00000524049 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
CCNC-218ENST00000524049 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
CCNC-218ENST00000524049 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
CCNC-218ENST00000524049 SPINT4Q6UDR6 99 aa3.93□□□□□ -1.78
CCNC-218ENST00000524049 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.79
CCNC-218ENST00000524049 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
CCNC-218ENST00000524049 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
CCNC-218ENST00000524049 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CCNC-218ENST00000524049 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
CCNC-218ENST00000524049 J3QR89 54 aa3.85□□□□□ -1.79
CCNC-218ENST00000524049 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
CCNC-218ENST00000524049 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
CCNC-218ENST00000524049 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
CCNC-218ENST00000524049 A0A1B0GU33 70 aa3.82□□□□□ -1.8
CCNC-218ENST00000524049 TNP1P09430 55 aa3.82□□□□□ -1.8
CCNC-218ENST00000524049 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
CCNC-218ENST00000524049 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
CCNC-218ENST00000524049 SMIM26A0A096LP01 95 aa3.74□□□□□ -1.81
CCNC-218ENST00000524049 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
CCNC-218ENST00000524049 COA5Q86WW8 74 aa3.73□□□□□ -1.81
CCNC-218ENST00000524049 V9GYY9 64 aa3.7□□□□□ -1.82
CCNC-218ENST00000524049 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
CCNC-218ENST00000524049 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
CCNC-218ENST00000524049 A0A1B0GV90 55 aa3.64□□□□□ -1.83
CCNC-218ENST00000524049 A8MU10 97 aa3.62□□□□□ -1.83
CCNC-218ENST00000524049 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
CCNC-218ENST00000524049 SERP2Q8N6R1 65 aa3.6□□□□□ -1.83
CCNC-218ENST00000524049 A0A1B0GU69 56 aa3.59□□□□□ -1.83
CCNC-218ENST00000524049 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
CCNC-218ENST00000524049 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CCNC-218ENST00000524049 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CCNC-218ENST00000524049 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
CCNC-218ENST00000524049 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
CCNC-218ENST00000524049 K7ERU9 68 aa3.5□□□□□ -1.85
CCNC-218ENST00000524049 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CCNC-218ENST00000524049 MT1AP04731 61 aa3.47□□□□□ -1.85
CCNC-218ENST00000524049 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
CCNC-218ENST00000524049 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
CCNC-218ENST00000524049 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
CCNC-218ENST00000524049 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
CCNC-218ENST00000524049 H7BZZ5 65 aa3.4□□□□□ -1.87
CCNC-218ENST00000524049 COX7CP15954 63 aa3.38□□□□□ -1.87
CCNC-218ENST00000524049 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
CCNC-218ENST00000524049 PSPHP1O15172 72 aa3.34□□□□□ -1.87
CCNC-218ENST00000524049 PRO0628Q9UI54 55 aa3.32□□□□□ -1.88
CCNC-218ENST00000524049 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
CCNC-218ENST00000524049 UQCR11O14957 56 aa3.27□□□□□ -1.89
CCNC-218ENST00000524049 LINC01558Q9Y6Z2 57 aa3.26□□□□□ -1.89
CCNC-218ENST00000524049 K7ERS5 55 aa3.21□□□□□ -1.9
CCNC-218ENST00000524049 ANAPC13Q9BS18 74 aa3.2□□□□□ -1.9
CCNC-218ENST00000524049 PMAIP1Q13794 54 aa3.17□□□□□ -1.9
CCNC-218ENST00000524049 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
CCNC-218ENST00000524049 ATP5EP56381 51 aaPredicted RBP3.13□□□□□ -1.91
CCNC-218ENST00000524049 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
CCNC-218ENST00000524049 RPS28P62857 69 aaKnown RBP3.05□□□□□ -1.92
CCNC-218ENST00000524049 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
CCNC-218ENST00000524049 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
CCNC-218ENST00000524049 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
CCNC-218ENST00000524049 CCDC179H3BU77 68 aa2.96□□□□□ -1.94
CCNC-218ENST00000524049 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
CCNC-218ENST00000524049 Q1T7F1 81 aa2.92□□□□□ -1.94
CCNC-218ENST00000524049 A6NED7 52 aa2.88□□□□□ -1.95
CCNC-218ENST00000524049 TMEM258P61165 79 aa2.88□□□□□ -1.95
CCNC-218ENST00000524049 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
CCNC-218ENST00000524049 ROMO1P60602 79 aa2.86□□□□□ -1.95
CCNC-218ENST00000524049 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
CCNC-218ENST00000524049 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CCNC-218ENST00000524049 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
CCNC-218ENST00000524049 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
CCNC-218ENST00000524049 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CCNC-218ENST00000524049 INE1O15225 51 aa2.18□□□□□ -2.06
CCNC-218ENST00000524049 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
CCNC-218ENST00000524049 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
CCNC-218ENST00000524049 PRM1P04553 51 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms