RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
CCNC-216ENST00000523961 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
CCNC-216ENST00000523961 PSPHP1O15172 72 aa4.74□□□□□ -1.65
CCNC-216ENST00000523961 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
CCNC-216ENST00000523961 TNP1P09430 55 aa4.71□□□□□ -1.66
CCNC-216ENST00000523961 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CCNC-216ENST00000523961 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CCNC-216ENST00000523961 SPRR2DP22532 72 aa4.69□□□□□ -1.66
CCNC-216ENST00000523961 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
CCNC-216ENST00000523961 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
CCNC-216ENST00000523961 K7ERS5 55 aa4.66□□□□□ -1.66
CCNC-216ENST00000523961 MT1EP04732 61 aa4.64□□□□□ -1.67
CCNC-216ENST00000523961 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
CCNC-216ENST00000523961 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
CCNC-216ENST00000523961 A6NED7 52 aa4.61□□□□□ -1.67
CCNC-216ENST00000523961 LCE3AQ5TA76 89 aa4.6□□□□□ -1.67
CCNC-216ENST00000523961 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
CCNC-216ENST00000523961 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
CCNC-216ENST00000523961 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
CCNC-216ENST00000523961 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
CCNC-216ENST00000523961 MT1GP13640 62 aa4.51□□□□□ -1.69
CCNC-216ENST00000523961 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
CCNC-216ENST00000523961 MT1LQ93083 61 aa4.47□□□□□ -1.69
CCNC-216ENST00000523961 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
CCNC-216ENST00000523961 CDC42SE1Q9NRR8 79 aa4.42□□□□□ -1.7
CCNC-216ENST00000523961 MT1MQ8N339 61 aa4.41□□□□□ -1.7
CCNC-216ENST00000523961 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CCNC-216ENST00000523961 ROMO1P60602 79 aa4.35□□□□□ -1.71
CCNC-216ENST00000523961 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CCNC-216ENST00000523961 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
CCNC-216ENST00000523961 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
CCNC-216ENST00000523961 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
CCNC-216ENST00000523961 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
CCNC-216ENST00000523961 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CCNC-216ENST00000523961 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
CCNC-216ENST00000523961 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
CCNC-216ENST00000523961 MT4P47944 62 aa4.07□□□□□ -1.76
CCNC-216ENST00000523961 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
CCNC-216ENST00000523961 MT3P25713 68 aa3.99□□□□□ -1.77
CCNC-216ENST00000523961 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CCNC-216ENST00000523961 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
CCNC-216ENST00000523961 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
CCNC-216ENST00000523961 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
CCNC-216ENST00000523961 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
CCNC-216ENST00000523961 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CCNC-216ENST00000523961 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
CCNC-216ENST00000523961 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
CCNC-216ENST00000523961 MT1AP04731 61 aa3.82□□□□□ -1.8
CCNC-216ENST00000523961 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
CCNC-216ENST00000523961 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
CCNC-216ENST00000523961 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
CCNC-216ENST00000523961 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
CCNC-216ENST00000523961 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
CCNC-216ENST00000523961 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
CCNC-216ENST00000523961 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
CCNC-216ENST00000523961 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
CCNC-216ENST00000523961 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CCNC-216ENST00000523961 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
CCNC-216ENST00000523961 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
CCNC-216ENST00000523961 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CCNC-216ENST00000523961 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CCNC-216ENST00000523961 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CCNC-216ENST00000523961 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
CCNC-216ENST00000523961 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CCNC-216ENST00000523961 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
CCNC-216ENST00000523961 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CCNC-216ENST00000523961 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
CCNC-216ENST00000523961 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CCNC-216ENST00000523961 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CCNC-216ENST00000523961 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
CCNC-216ENST00000523961 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
CCNC-216ENST00000523961 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CCNC-216ENST00000523961 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
CCNC-216ENST00000523961 INE1O15225 51 aa2.25□□□□□ -2.05
CCNC-216ENST00000523961 PRM1P04553 51 aa2.22□□□□□ -2.05
CCNC-216ENST00000523961 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CCNC-216ENST00000523961 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
CCNC-216ENST00000523961 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 33 ms