RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
NKX3-1-202ENST00000523261 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
NKX3-1-202ENST00000523261 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
NKX3-1-202ENST00000523261 H3BPC8 53 aa4.17□□□□□ -1.74
NKX3-1-202ENST00000523261 K7ERU9 68 aa4.17□□□□□ -1.74
NKX3-1-202ENST00000523261 ETDBQ3ZM63 59 aa4.14□□□□□ -1.75
NKX3-1-202ENST00000523261 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
NKX3-1-202ENST00000523261 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
NKX3-1-202ENST00000523261 J3QR89 54 aa4.12□□□□□ -1.75
NKX3-1-202ENST00000523261 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
NKX3-1-202ENST00000523261 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
NKX3-1-202ENST00000523261 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
NKX3-1-202ENST00000523261 TNP1P09430 55 aa4.1□□□□□ -1.75
NKX3-1-202ENST00000523261 MT1AP04731 61 aa4.09□□□□□ -1.75
NKX3-1-202ENST00000523261 SEC61GP60059 68 aa4.09□□□□□ -1.75
NKX3-1-202ENST00000523261 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
NKX3-1-202ENST00000523261 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
NKX3-1-202ENST00000523261 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
NKX3-1-202ENST00000523261 SCGB1A1P11684 91 aa3.99□□□□□ -1.77
NKX3-1-202ENST00000523261 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
NKX3-1-202ENST00000523261 A0A1B0GU33 70 aa3.85□□□□□ -1.79
NKX3-1-202ENST00000523261 ANAPC13Q9BS18 74 aa3.83□□□□□ -1.8
NKX3-1-202ENST00000523261 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
NKX3-1-202ENST00000523261 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
NKX3-1-202ENST00000523261 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
NKX3-1-202ENST00000523261 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
NKX3-1-202ENST00000523261 MT3P25713 68 aa3.76□□□□□ -1.81
NKX3-1-202ENST00000523261 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
NKX3-1-202ENST00000523261 COX7CP15954 63 aa3.75□□□□□ -1.81
NKX3-1-202ENST00000523261 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
NKX3-1-202ENST00000523261 A8MU10 97 aa3.74□□□□□ -1.81
NKX3-1-202ENST00000523261 SMIM20Q8N5G0 67 aa3.74□□□□□ -1.81
NKX3-1-202ENST00000523261 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
NKX3-1-202ENST00000523261 V9GYY9 64 aa3.73□□□□□ -1.81
NKX3-1-202ENST00000523261 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
NKX3-1-202ENST00000523261 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
NKX3-1-202ENST00000523261 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
NKX3-1-202ENST00000523261 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
NKX3-1-202ENST00000523261 TMEM258P61165 79 aa3.63□□□□□ -1.83
NKX3-1-202ENST00000523261 H7BZZ5 65 aa3.61□□□□□ -1.83
NKX3-1-202ENST00000523261 COA5Q86WW8 74 aa3.61□□□□□ -1.83
NKX3-1-202ENST00000523261 SNURFQ9Y675 71 aa3.59□□□□□ -1.83
NKX3-1-202ENST00000523261 ATP5EP56381 51 aaPredicted RBP3.56□□□□□ -1.84
NKX3-1-202ENST00000523261 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
NKX3-1-202ENST00000523261 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
NKX3-1-202ENST00000523261 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
NKX3-1-202ENST00000523261 A0A1B0GU69 56 aa3.41□□□□□ -1.86
NKX3-1-202ENST00000523261 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
NKX3-1-202ENST00000523261 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
NKX3-1-202ENST00000523261 Q1T7F1 81 aa3.36□□□□□ -1.87
NKX3-1-202ENST00000523261 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
NKX3-1-202ENST00000523261 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
NKX3-1-202ENST00000523261 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
NKX3-1-202ENST00000523261 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
NKX3-1-202ENST00000523261 PSPHP1O15172 72 aa3.26□□□□□ -1.89
NKX3-1-202ENST00000523261 PRR15LQ9BU68 103 aa3.24□□□□□ -1.89
NKX3-1-202ENST00000523261 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
NKX3-1-202ENST00000523261 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
NKX3-1-202ENST00000523261 A6NED7 52 aa3.15□□□□□ -1.91
NKX3-1-202ENST00000523261 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
NKX3-1-202ENST00000523261 UQCR11O14957 56 aa3.1□□□□□ -1.91
NKX3-1-202ENST00000523261 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
NKX3-1-202ENST00000523261 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
NKX3-1-202ENST00000523261 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
NKX3-1-202ENST00000523261 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
NKX3-1-202ENST00000523261 K7ERS5 55 aa2.91□□□□□ -1.94
NKX3-1-202ENST00000523261 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
NKX3-1-202ENST00000523261 ROMO1P60602 79 aa2.82□□□□□ -1.96
NKX3-1-202ENST00000523261 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
NKX3-1-202ENST00000523261 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
NKX3-1-202ENST00000523261 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
NKX3-1-202ENST00000523261 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
NKX3-1-202ENST00000523261 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
NKX3-1-202ENST00000523261 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
NKX3-1-202ENST00000523261 INE1O15225 51 aa2.16□□□□□ -2.06
NKX3-1-202ENST00000523261 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
NKX3-1-202ENST00000523261 PRM1P04553 51 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 155.2 ms