RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ROMO1P60602 79 aa3.08□□□□□ -1.92
CSMD1-211ENST00000523062 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
CSMD1-211ENST00000523062 MT2AP02795 61 aa3.05□□□□□ -1.92
CSMD1-211ENST00000523062 MT1FP04733 61 aa3.03□□□□□ -1.92
CSMD1-211ENST00000523062 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
CSMD1-211ENST00000523062 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
CSMD1-211ENST00000523062 CAMK2N1Q7Z7J9 78 aa3□□□□□ -1.93
CSMD1-211ENST00000523062 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
CSMD1-211ENST00000523062 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
CSMD1-211ENST00000523062 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
CSMD1-211ENST00000523062 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
CSMD1-211ENST00000523062 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
CSMD1-211ENST00000523062 MT1BP07438 61 aa2.89□□□□□ -1.95
CSMD1-211ENST00000523062 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
CSMD1-211ENST00000523062 TNP1P09430 55 aa2.87□□□□□ -1.95
CSMD1-211ENST00000523062 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
CSMD1-211ENST00000523062 MT1XP80297 61 aa2.81□□□□□ -1.96
CSMD1-211ENST00000523062 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
CSMD1-211ENST00000523062 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
CSMD1-211ENST00000523062 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CSMD1-211ENST00000523062 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
CSMD1-211ENST00000523062 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CSMD1-211ENST00000523062 USH2AO75445 5202 aa2.72□□□□□ -1.97
CSMD1-211ENST00000523062 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
CSMD1-211ENST00000523062 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
CSMD1-211ENST00000523062 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
CSMD1-211ENST00000523062 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
CSMD1-211ENST00000523062 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
CSMD1-211ENST00000523062 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
CSMD1-211ENST00000523062 NEBP20929 6669 aa2.62□□□□□ -1.99
CSMD1-211ENST00000523062 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
CSMD1-211ENST00000523062 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
CSMD1-211ENST00000523062 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
CSMD1-211ENST00000523062 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
CSMD1-211ENST00000523062 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
CSMD1-211ENST00000523062 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
CSMD1-211ENST00000523062 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
CSMD1-211ENST00000523062 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
CSMD1-211ENST00000523062 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
CSMD1-211ENST00000523062 MT1EP04732 61 aa2.47□□□□□ -2.01
CSMD1-211ENST00000523062 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
CSMD1-211ENST00000523062 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CSMD1-211ENST00000523062 MT1LQ93083 61 aa2.43□□□□□ -2.02
CSMD1-211ENST00000523062 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
CSMD1-211ENST00000523062 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CSMD1-211ENST00000523062 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
CSMD1-211ENST00000523062 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
CSMD1-211ENST00000523062 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
CSMD1-211ENST00000523062 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
CSMD1-211ENST00000523062 MT1GP13640 62 aa2.33□□□□□ -2.04
CSMD1-211ENST00000523062 MT1MQ8N339 61 aa2.32□□□□□ -2.04
CSMD1-211ENST00000523062 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
CSMD1-211ENST00000523062 SPRR2EP22531 72 aa2.26□□□□□ -2.05
CSMD1-211ENST00000523062 SPRR2BP35325 72 aa2.26□□□□□ -2.05
CSMD1-211ENST00000523062 SPRR2AP35326 72 aa2.26□□□□□ -2.05
CSMD1-211ENST00000523062 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CSMD1-211ENST00000523062 SPRR2DP22532 72 aa2.19□□□□□ -2.06
CSMD1-211ENST00000523062 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
CSMD1-211ENST00000523062 MT1AP04731 61 aa2.08□□□□□ -2.08
CSMD1-211ENST00000523062 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
CSMD1-211ENST00000523062 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CSMD1-211ENST00000523062 INE1O15225 51 aa2.07□□□□□ -2.08
CSMD1-211ENST00000523062 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
CSMD1-211ENST00000523062 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
CSMD1-211ENST00000523062 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
CSMD1-211ENST00000523062 MT4P47944 62 aa1.98□□□□□ -2.09
CSMD1-211ENST00000523062 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CSMD1-211ENST00000523062 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
CSMD1-211ENST00000523062 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CSMD1-211ENST00000523062 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
CSMD1-211ENST00000523062 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CSMD1-211ENST00000523062 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
CSMD1-211ENST00000523062 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
CSMD1-211ENST00000523062 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
CSMD1-211ENST00000523062 PRM1P04553 51 aa1.6□□□□□ -2.15
CSMD1-211ENST00000523062 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
CSMD1-211ENST00000523062 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CSMD1-211ENST00000523062 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 50.8 ms