RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
SREK1-212ENST00000522912 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
SREK1-212ENST00000522912 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
SREK1-212ENST00000522912 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
SREK1-212ENST00000522912 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
SREK1-212ENST00000522912 MT1GP13640 62 aa5.72□□□□□ -1.49
SREK1-212ENST00000522912 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
SREK1-212ENST00000522912 MT1MQ8N339 61 aa5.69□□□□□ -1.5
SREK1-212ENST00000522912 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
SREK1-212ENST00000522912 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
SREK1-212ENST00000522912 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
SREK1-212ENST00000522912 KRTAP5-9P26371 169 aa5.64□□□□□ -1.51
SREK1-212ENST00000522912 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
SREK1-212ENST00000522912 SYNE2Q8WXH0 6885 aaKnown RBP5.59□□□□□ -1.51
SREK1-212ENST00000522912 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
SREK1-212ENST00000522912 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
SREK1-212ENST00000522912 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
SREK1-212ENST00000522912 SPRR2EP22531 72 aa5.43□□□□□ -1.54
SREK1-212ENST00000522912 SPRR2BP35325 72 aa5.43□□□□□ -1.54
SREK1-212ENST00000522912 SPRR2AP35326 72 aa5.43□□□□□ -1.54
SREK1-212ENST00000522912 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
SREK1-212ENST00000522912 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
SREK1-212ENST00000522912 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
SREK1-212ENST00000522912 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
SREK1-212ENST00000522912 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SREK1-212ENST00000522912 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SREK1-212ENST00000522912 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
SREK1-212ENST00000522912 INE1O15225 51 aa5.13□□□□□ -1.59
SREK1-212ENST00000522912 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
SREK1-212ENST00000522912 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
SREK1-212ENST00000522912 MT1AP04731 61 aa5.04□□□□□ -1.6
SREK1-212ENST00000522912 LCE3BQ5TA77 95 aa5□□□□□ -1.61
SREK1-212ENST00000522912 NEBP20929 6669 aa4.96□□□□□ -1.62
SREK1-212ENST00000522912 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
SREK1-212ENST00000522912 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SREK1-212ENST00000522912 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
SREK1-212ENST00000522912 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SREK1-212ENST00000522912 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
SREK1-212ENST00000522912 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
SREK1-212ENST00000522912 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
SREK1-212ENST00000522912 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
SREK1-212ENST00000522912 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
SREK1-212ENST00000522912 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
SREK1-212ENST00000522912 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
SREK1-212ENST00000522912 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
SREK1-212ENST00000522912 MT4P47944 62 aa4.56□□□□□ -1.68
SREK1-212ENST00000522912 MT3P25713 68 aa4.55□□□□□ -1.68
SREK1-212ENST00000522912 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
SREK1-212ENST00000522912 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
SREK1-212ENST00000522912 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
SREK1-212ENST00000522912 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
SREK1-212ENST00000522912 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
SREK1-212ENST00000522912 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
SREK1-212ENST00000522912 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
SREK1-212ENST00000522912 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SREK1-212ENST00000522912 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
SREK1-212ENST00000522912 PRM1P04553 51 aa4□□□□□ -1.77
SREK1-212ENST00000522912 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SREK1-212ENST00000522912 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SREK1-212ENST00000522912 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
SREK1-212ENST00000522912 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
SREK1-212ENST00000522912 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
SREK1-212ENST00000522912 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
SREK1-212ENST00000522912 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SREK1-212ENST00000522912 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
SREK1-212ENST00000522912 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
SREK1-212ENST00000522912 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SREK1-212ENST00000522912 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
SREK1-212ENST00000522912 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SREK1-212ENST00000522912 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SREK1-212ENST00000522912 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SREK1-212ENST00000522912 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SREK1-212ENST00000522912 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
SREK1-212ENST00000522912 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
SREK1-212ENST00000522912 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SREK1-212ENST00000522912 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SREK1-212ENST00000522912 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SREK1-212ENST00000522912 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 257.8 ms