RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
SPIDR-220ENST00000522900 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
SPIDR-220ENST00000522900 MT4P47944 62 aa6.44□□□□□ -1.38
SPIDR-220ENST00000522900 TMEM258P61165 79 aa6.41□□□□□ -1.38
SPIDR-220ENST00000522900 UQCR11O14957 56 aa6.4□□□□□ -1.38
SPIDR-220ENST00000522900 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.39
SPIDR-220ENST00000522900 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SPIDR-220ENST00000522900 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
SPIDR-220ENST00000522900 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
SPIDR-220ENST00000522900 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
SPIDR-220ENST00000522900 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
SPIDR-220ENST00000522900 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
SPIDR-220ENST00000522900 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
SPIDR-220ENST00000522900 PSPHP1O15172 72 aa6.14□□□□□ -1.43
SPIDR-220ENST00000522900 K7ERS5 55 aa6.11□□□□□ -1.43
SPIDR-220ENST00000522900 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
SPIDR-220ENST00000522900 Q1T7F1 81 aa6.07□□□□□ -1.44
SPIDR-220ENST00000522900 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
SPIDR-220ENST00000522900 V9GYY9 64 aa6.06□□□□□ -1.44
SPIDR-220ENST00000522900 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SPIDR-220ENST00000522900 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
SPIDR-220ENST00000522900 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SPIDR-220ENST00000522900 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
SPIDR-220ENST00000522900 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
SPIDR-220ENST00000522900 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
SPIDR-220ENST00000522900 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
SPIDR-220ENST00000522900 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
SPIDR-220ENST00000522900 A6NED7 52 aa5.89□□□□□ -1.47
SPIDR-220ENST00000522900 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
SPIDR-220ENST00000522900 KRTAP5-7Q6L8G8 165 aa5.82□□□□□ -1.48
SPIDR-220ENST00000522900 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
SPIDR-220ENST00000522900 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
SPIDR-220ENST00000522900 ROMO1P60602 79 aa5.73□□□□□ -1.49
SPIDR-220ENST00000522900 RPS28P62857 69 aaKnown RBP5.66□□□□□ -1.5
SPIDR-220ENST00000522900 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
SPIDR-220ENST00000522900 MT1AP04731 61 aa5.64□□□□□ -1.51
SPIDR-220ENST00000522900 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
SPIDR-220ENST00000522900 KRTAP5-2Q701N4 177 aa5.55□□□□□ -1.52
SPIDR-220ENST00000522900 PCP4P48539 62 aa5.5□□□□□ -1.53
SPIDR-220ENST00000522900 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
SPIDR-220ENST00000522900 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
SPIDR-220ENST00000522900 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
SPIDR-220ENST00000522900 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
SPIDR-220ENST00000522900 MT3P25713 68 aa5.16□□□□□ -1.58
SPIDR-220ENST00000522900 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
SPIDR-220ENST00000522900 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
SPIDR-220ENST00000522900 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
SPIDR-220ENST00000522900 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
SPIDR-220ENST00000522900 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
SPIDR-220ENST00000522900 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
SPIDR-220ENST00000522900 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
SPIDR-220ENST00000522900 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
SPIDR-220ENST00000522900 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
SPIDR-220ENST00000522900 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SPIDR-220ENST00000522900 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SPIDR-220ENST00000522900 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
SPIDR-220ENST00000522900 LCE1BQ5T7P3 118 aa4.51□□□□□ -1.69
SPIDR-220ENST00000522900 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
SPIDR-220ENST00000522900 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
SPIDR-220ENST00000522900 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
SPIDR-220ENST00000522900 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
SPIDR-220ENST00000522900 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
SPIDR-220ENST00000522900 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
SPIDR-220ENST00000522900 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
SPIDR-220ENST00000522900 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
SPIDR-220ENST00000522900 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
SPIDR-220ENST00000522900 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
SPIDR-220ENST00000522900 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
SPIDR-220ENST00000522900 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
SPIDR-220ENST00000522900 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
SPIDR-220ENST00000522900 H3BS24 57 aa3.16□□□□□ -1.9
SPIDR-220ENST00000522900 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
SPIDR-220ENST00000522900 PRM1P04553 51 aa2.95□□□□□ -1.94
SPIDR-220ENST00000522900 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
SPIDR-220ENST00000522900 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
SPIDR-220ENST00000522900 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
SPIDR-220ENST00000522900 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
SPIDR-220ENST00000522900 INE1O15225 51 aa2.25□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms