RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
SDCBP-210ENST00000522843 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
SDCBP-210ENST00000522843 H1FX-AS1Q4G0G2 97 aa2.95□□□□□ -1.94
SDCBP-210ENST00000522843 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
SDCBP-210ENST00000522843 SPRR2DP22532 72 aa2.94□□□□□ -1.94
SDCBP-210ENST00000522843 Q5VV11 94 aa2.94□□□□□ -1.94
SDCBP-210ENST00000522843 Q1T7F1 81 aa2.93□□□□□ -1.94
SDCBP-210ENST00000522843 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
SDCBP-210ENST00000522843 CHKB-CPT1BH3BT56 60 aa2.9□□□□□ -1.95
SDCBP-210ENST00000522843 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
SDCBP-210ENST00000522843 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
SDCBP-210ENST00000522843 LCA10Q71F78 164 aa2.88□□□□□ -1.95
SDCBP-210ENST00000522843 S4R3F8 94 aa2.88□□□□□ -1.95
SDCBP-210ENST00000522843 CSAG1Q6PB30 78 aa2.86□□□□□ -1.95
SDCBP-210ENST00000522843 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
SDCBP-210ENST00000522843 H0YAA0 97 aa2.85□□□□□ -1.95
SDCBP-210ENST00000522843 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
SDCBP-210ENST00000522843 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
SDCBP-210ENST00000522843 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
SDCBP-210ENST00000522843 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
SDCBP-210ENST00000522843 A0A1B0GU69 56 aa2.8□□□□□ -1.96
SDCBP-210ENST00000522843 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
SDCBP-210ENST00000522843 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
SDCBP-210ENST00000522843 K7ERS5 55 aa2.76□□□□□ -1.97
SDCBP-210ENST00000522843 MT1XP80297 61 aa2.76□□□□□ -1.97
SDCBP-210ENST00000522843 A0A1B0GU33 70 aa2.75□□□□□ -1.97
SDCBP-210ENST00000522843 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
SDCBP-210ENST00000522843 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
SDCBP-210ENST00000522843 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
SDCBP-210ENST00000522843 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SDCBP-210ENST00000522843 M0QZ58 72 aa2.74□□□□□ -1.97
SDCBP-210ENST00000522843 UQCR11O14957 56 aa2.74□□□□□ -1.97
SDCBP-210ENST00000522843 P0C880 135 aa2.74□□□□□ -1.97
SDCBP-210ENST00000522843 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
SDCBP-210ENST00000522843 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
SDCBP-210ENST00000522843 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
SDCBP-210ENST00000522843 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
SDCBP-210ENST00000522843 A6NED7 52 aa2.7□□□□□ -1.98
SDCBP-210ENST00000522843 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
SDCBP-210ENST00000522843 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
SDCBP-210ENST00000522843 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
SDCBP-210ENST00000522843 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
SDCBP-210ENST00000522843 R4GN34 69 aa2.65□□□□□ -1.99
SDCBP-210ENST00000522843 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
SDCBP-210ENST00000522843 MT4P47944 62 aa2.62□□□□□ -1.99
SDCBP-210ENST00000522843 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
SDCBP-210ENST00000522843 A0A0D9SG42 100 aa2.56□□□□□ -2
SDCBP-210ENST00000522843 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
SDCBP-210ENST00000522843 LINC01554Q52M75 96 aa2.53□□□□□ -2
SDCBP-210ENST00000522843 PLAC4Q8WY50 150 aa2.53□□□□□ -2
SDCBP-210ENST00000522843 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
SDCBP-210ENST00000522843 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
SDCBP-210ENST00000522843 ROMO1P60602 79 aa2.48□□□□□ -2.01
SDCBP-210ENST00000522843 MT1EP04732 61 aa2.47□□□□□ -2.01
SDCBP-210ENST00000522843 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
SDCBP-210ENST00000522843 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
SDCBP-210ENST00000522843 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
SDCBP-210ENST00000522843 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
SDCBP-210ENST00000522843 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SDCBP-210ENST00000522843 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
SDCBP-210ENST00000522843 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SDCBP-210ENST00000522843 TNP1P09430 55 aa2.38□□□□□ -2.03
SDCBP-210ENST00000522843 MT1GP13640 62 aa2.38□□□□□ -2.03
SDCBP-210ENST00000522843 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
SDCBP-210ENST00000522843 MT1MQ8N339 61 aa2.37□□□□□ -2.03
SDCBP-210ENST00000522843 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
SDCBP-210ENST00000522843 MT1LQ93083 61 aa2.28□□□□□ -2.04
SDCBP-210ENST00000522843 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
SDCBP-210ENST00000522843 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
SDCBP-210ENST00000522843 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
SDCBP-210ENST00000522843 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
SDCBP-210ENST00000522843 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
SDCBP-210ENST00000522843 MT1AP04731 61 aa1.93□□□□□ -2.1
SDCBP-210ENST00000522843 INE1O15225 51 aa1.8□□□□□ -2.12
SDCBP-210ENST00000522843 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SDCBP-210ENST00000522843 PRM1P04553 51 aa1.26□□□□□ -2.21
SDCBP-210ENST00000522843 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
SDCBP-210ENST00000522843 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 92.3 ms