RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 KRTAP9-8Q9BYQ0 159 aa2.89□□□□□ -1.95
HMGB4-204ENST00000522796 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
HMGB4-204ENST00000522796 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
HMGB4-204ENST00000522796 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
HMGB4-204ENST00000522796 SPRR2GQ9BYE4 73 aa2.86□□□□□ -1.95
HMGB4-204ENST00000522796 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.96
HMGB4-204ENST00000522796 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
HMGB4-204ENST00000522796 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
HMGB4-204ENST00000522796 KRTAP9-3Q9BYQ3 159 aa2.79□□□□□ -1.96
HMGB4-204ENST00000522796 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
HMGB4-204ENST00000522796 MT1XP80297 61 aa2.67□□□□□ -1.98
HMGB4-204ENST00000522796 MT1HP80294 61 aa2.65□□□□□ -1.99
HMGB4-204ENST00000522796 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
HMGB4-204ENST00000522796 PRM1P04553 51 aa2.58□□□□□ -2
HMGB4-204ENST00000522796 MT2AP02795 61 aa2.53□□□□□ -2
HMGB4-204ENST00000522796 MT1FP04733 61 aa2.53□□□□□ -2
HMGB4-204ENST00000522796 MT1BP07438 61 aa2.52□□□□□ -2.01
HMGB4-204ENST00000522796 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
HMGB4-204ENST00000522796 MT3P25713 68 aa2.49□□□□□ -2.01
HMGB4-204ENST00000522796 USH2AO75445 5202 aa2.48□□□□□ -2.01
HMGB4-204ENST00000522796 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
HMGB4-204ENST00000522796 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
HMGB4-204ENST00000522796 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
HMGB4-204ENST00000522796 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
HMGB4-204ENST00000522796 MT1AP04731 61 aa2.41□□□□□ -2.02
HMGB4-204ENST00000522796 MT1EP04732 61 aa2.38□□□□□ -2.03
HMGB4-204ENST00000522796 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
HMGB4-204ENST00000522796 MT1LQ93083 61 aa2.37□□□□□ -2.03
HMGB4-204ENST00000522796 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
HMGB4-204ENST00000522796 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
HMGB4-204ENST00000522796 KMT2DO14686 5537 aa2.27□□□□□ -2.05
HMGB4-204ENST00000522796 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
HMGB4-204ENST00000522796 MT1GP13640 62 aa2.24□□□□□ -2.05
HMGB4-204ENST00000522796 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
HMGB4-204ENST00000522796 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
HMGB4-204ENST00000522796 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.06
HMGB4-204ENST00000522796 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
HMGB4-204ENST00000522796 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
HMGB4-204ENST00000522796 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
HMGB4-204ENST00000522796 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
HMGB4-204ENST00000522796 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
HMGB4-204ENST00000522796 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
HMGB4-204ENST00000522796 SPRR2AP35326 72 aa2.07□□□□□ -2.08
HMGB4-204ENST00000522796 MT1MQ8N339 61 aa2.06□□□□□ -2.08
HMGB4-204ENST00000522796 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
HMGB4-204ENST00000522796 SPRR2DP22532 72 aa2.03□□□□□ -2.08
HMGB4-204ENST00000522796 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
HMGB4-204ENST00000522796 SPRR2BP35325 72 aa2.01□□□□□ -2.09
HMGB4-204ENST00000522796 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
HMGB4-204ENST00000522796 SPRR2EP22531 72 aa1.99□□□□□ -2.09
HMGB4-204ENST00000522796 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
HMGB4-204ENST00000522796 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
HMGB4-204ENST00000522796 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
HMGB4-204ENST00000522796 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
HMGB4-204ENST00000522796 NEBP20929 6669 aa1.95□□□□□ -2.1
HMGB4-204ENST00000522796 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
HMGB4-204ENST00000522796 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
HMGB4-204ENST00000522796 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
HMGB4-204ENST00000522796 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
HMGB4-204ENST00000522796 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
HMGB4-204ENST00000522796 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
HMGB4-204ENST00000522796 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
HMGB4-204ENST00000522796 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
HMGB4-204ENST00000522796 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
HMGB4-204ENST00000522796 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
HMGB4-204ENST00000522796 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
HMGB4-204ENST00000522796 MT4P47944 62 aa1.64□□□□□ -2.15
HMGB4-204ENST00000522796 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
HMGB4-204ENST00000522796 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
HMGB4-204ENST00000522796 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
HMGB4-204ENST00000522796 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
HMGB4-204ENST00000522796 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
HMGB4-204ENST00000522796 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
HMGB4-204ENST00000522796 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
HMGB4-204ENST00000522796 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
HMGB4-204ENST00000522796 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
HMGB4-204ENST00000522796 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 44.8 ms