RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 TMEM258P61165 79 aa7.56□□□□□ -1.2
HOXA3-206ENST00000522788 GPR98Q8WXG9 6306 aa7.52□□□□□ -1.21
HOXA3-206ENST00000522788 KRTAP4-3Q9BYR4 195 aa7.5□□□□□ -1.21
HOXA3-206ENST00000522788 UQCR11O14957 56 aa7.48□□□□□ -1.21
HOXA3-206ENST00000522788 LCE1DQ5T752 114 aa7.45□□□□□ -1.22
HOXA3-206ENST00000522788 PCP4P48539 62 aa7.44□□□□□ -1.22
HOXA3-206ENST00000522788 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
HOXA3-206ENST00000522788 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
HOXA3-206ENST00000522788 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
HOXA3-206ENST00000522788 MT4P47944 62 aa7.35□□□□□ -1.23
HOXA3-206ENST00000522788 KRTAP5-4Q6L8H1 288 aa7.33□□□□□ -1.24
HOXA3-206ENST00000522788 KRTAP4-7Q9BYR0 210 aa7.33□□□□□ -1.24
HOXA3-206ENST00000522788 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
HOXA3-206ENST00000522788 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
HOXA3-206ENST00000522788 KRTAP4-6Q9BYQ5 205 aa7.18□□□□□ -1.26
HOXA3-206ENST00000522788 PSPHP1O15172 72 aa7.16□□□□□ -1.26
HOXA3-206ENST00000522788 AHNAK2Q8IVF2 5795 aa7.14□□□□□ -1.27
HOXA3-206ENST00000522788 V9GYY9 64 aa7.14□□□□□ -1.27
HOXA3-206ENST00000522788 Q1T7F1 81 aa7.13□□□□□ -1.27
HOXA3-206ENST00000522788 K7ERS5 55 aa7.12□□□□□ -1.27
HOXA3-206ENST00000522788 KRTAP5-5Q701N2 237 aaPredicted RBP7.05□□□□□ -1.28
HOXA3-206ENST00000522788 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
HOXA3-206ENST00000522788 KRTAP5-10Q6L8G5 202 aa6.95□□□□□ -1.3
HOXA3-206ENST00000522788 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
HOXA3-206ENST00000522788 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
HOXA3-206ENST00000522788 KRTAP20-2Q3LI61 65 aa6.9□□□□□ -1.3
HOXA3-206ENST00000522788 SYNE1Q8NF91 8797 aaKnown RBP6.89□□□□□ -1.31
HOXA3-206ENST00000522788 A6NED7 52 aa6.88□□□□□ -1.31
HOXA3-206ENST00000522788 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
HOXA3-206ENST00000522788 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
HOXA3-206ENST00000522788 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
HOXA3-206ENST00000522788 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
HOXA3-206ENST00000522788 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
HOXA3-206ENST00000522788 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
HOXA3-206ENST00000522788 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
HOXA3-206ENST00000522788 ROMO1P60602 79 aa6.69□□□□□ -1.34
HOXA3-206ENST00000522788 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
HOXA3-206ENST00000522788 MT1AP04731 61 aa6.53□□□□□ -1.36
HOXA3-206ENST00000522788 KRTAP6-1Q3LI64 71 aa6.5□□□□□ -1.37
HOXA3-206ENST00000522788 KRTAP9-6A8MVA2 160 aa6.47□□□□□ -1.37
HOXA3-206ENST00000522788 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
HOXA3-206ENST00000522788 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
HOXA3-206ENST00000522788 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
HOXA3-206ENST00000522788 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
HOXA3-206ENST00000522788 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
HOXA3-206ENST00000522788 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
HOXA3-206ENST00000522788 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
HOXA3-206ENST00000522788 OBSCNQ5VST9 7968 aa6□□□□□ -1.45
HOXA3-206ENST00000522788 MT3P25713 68 aa5.95□□□□□ -1.46
HOXA3-206ENST00000522788 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
HOXA3-206ENST00000522788 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
HOXA3-206ENST00000522788 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
HOXA3-206ENST00000522788 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
HOXA3-206ENST00000522788 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
HOXA3-206ENST00000522788 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
HOXA3-206ENST00000522788 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
HOXA3-206ENST00000522788 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
HOXA3-206ENST00000522788 LCE1EQ5T753 118 aa5.49□□□□□ -1.53
HOXA3-206ENST00000522788 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
HOXA3-206ENST00000522788 KRTAP4-12Q9BQ66 201 aa5.34□□□□□ -1.55
HOXA3-206ENST00000522788 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
HOXA3-206ENST00000522788 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.59
HOXA3-206ENST00000522788 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
HOXA3-206ENST00000522788 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
HOXA3-206ENST00000522788 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
HOXA3-206ENST00000522788 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
HOXA3-206ENST00000522788 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
HOXA3-206ENST00000522788 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
HOXA3-206ENST00000522788 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
HOXA3-206ENST00000522788 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
HOXA3-206ENST00000522788 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
HOXA3-206ENST00000522788 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
HOXA3-206ENST00000522788 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
HOXA3-206ENST00000522788 INE1O15225 51 aa3.87□□□□□ -1.79
HOXA3-206ENST00000522788 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
HOXA3-206ENST00000522788 PRM1P04553 51 aa3.43□□□□□ -1.86
HOXA3-206ENST00000522788 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
HOXA3-206ENST00000522788 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 14.8 ms