RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	CRCT1	Q9UGL9	99 aa		6.01	□□□□□ -1.45
FAM49B-223	ENST00000522746	LCE3C	Q5T5A8	94 aa		5.97	□□□□□ -1.45
FAM49B-223	ENST00000522746	MT1E	P04732	61 aa		5.95	□□□□□ -1.46
FAM49B-223	ENST00000522746	MACF1	Q9UPN3	7388 aa	Known RBP	5.92	□□□□□ -1.46
FAM49B-223	ENST00000522746	MT1L	Q93083	61 aa		5.88	□□□□□ -1.47
FAM49B-223	ENST00000522746	MUC12	Q9UKN1	5478 aa		5.86	□□□□□ -1.47
FAM49B-223	ENST00000522746	KRTAP4-7	Q9BYR0	210 aa		5.84	□□□□□ -1.47
FAM49B-223	ENST00000522746	SYNE2	Q8WXH0	6885 aa	Known RBP	5.8	□□□□□ -1.48
FAM49B-223	ENST00000522746	LCE1D	Q5T752	114 aa		5.77	□□□□□ -1.49
FAM49B-223	ENST00000522746	KRTAP19-4	Q3LI73	84 aa		5.74	□□□□□ -1.49
FAM49B-223	ENST00000522746	SPRR2F	Q96RM1	72 aa		5.74	□□□□□ -1.49
FAM49B-223	ENST00000522746	KRTAP9-6	A8MVA2	160 aa		5.73	□□□□□ -1.49
FAM49B-223	ENST00000522746	KRTAP19-3	Q7Z4W3	81 aa		5.65	□□□□□ -1.51
FAM49B-223	ENST00000522746	KRTAP4-9	Q9BYQ8	210 aa		5.64	□□□□□ -1.51
FAM49B-223	ENST00000522746	KRTAP4-3	Q9BYR4	195 aa		5.62	□□□□□ -1.51
FAM49B-223	ENST00000522746	KRTAP4-2	Q9BYR5	136 aa		5.61	□□□□□ -1.51
FAM49B-223	ENST00000522746	MT1G	P13640	62 aa		5.59	□□□□□ -1.51
FAM49B-223	ENST00000522746	MT1M	Q8N339	61 aa		5.59	□□□□□ -1.52
FAM49B-223	ENST00000522746	MDN1	Q9NU22	5596 aa		5.59	□□□□□ -1.52
FAM49B-223	ENST00000522746	KRTAP5-9	P26371	169 aa		5.54	□□□□□ -1.52
FAM49B-223	ENST00000522746		A0A0A0MQY5	61 aa		5.53	□□□□□ -1.52
FAM49B-223	ENST00000522746	LCE5A	Q5TCM9	118 aa		5.52	□□□□□ -1.53
FAM49B-223	ENST00000522746	KRTAP9-7	A8MTY7	169 aa		5.51	□□□□□ -1.53
FAM49B-223	ENST00000522746	LCE1A	Q5T7P2	110 aa		5.45	□□□□□ -1.54
FAM49B-223	ENST00000522746	DST	Q03001	7570 aa	Known RBP	5.4	□□□□□ -1.54
FAM49B-223	ENST00000522746	SPRR2E	P22531	72 aa		5.39	□□□□□ -1.55
FAM49B-223	ENST00000522746	SPRR2B	P35325	72 aa		5.39	□□□□□ -1.55
FAM49B-223	ENST00000522746	SPRR2A	P35326	72 aa		5.39	□□□□□ -1.55
FAM49B-223	ENST00000522746	KRTAP4-11	Q9BYQ6	195 aa		5.39	□□□□□ -1.55
FAM49B-223	ENST00000522746	KRTAP6-3	Q3LI67	103 aa		5.37	□□□□□ -1.55
FAM49B-223	ENST00000522746	KRTAP2-3	P0C7H8	128 aa		5.35	□□□□□ -1.55
FAM49B-223	ENST00000522746	KRTAP2-4	Q9BYR9	128 aa		5.35	□□□□□ -1.55
FAM49B-223	ENST00000522746	KRTAP2-1	Q9BYU5	128 aa		5.35	□□□□□ -1.55
FAM49B-223	ENST00000522746	LCE4A	Q5TA78	99 aa		5.29	□□□□□ -1.56
FAM49B-223	ENST00000522746	KRTAP5-3	Q6L8H2	238 aa		5.21	□□□□□ -1.58
FAM49B-223	ENST00000522746	SPRR2D	P22532	72 aa		5.18	□□□□□ -1.58
FAM49B-223	ENST00000522746	NEB	P20929	6669 aa		5.11	□□□□□ -1.59
FAM49B-223	ENST00000522746	INE1	O15225	51 aa		5.1	□□□□□ -1.59
FAM49B-223	ENST00000522746	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.99	□□□□□ -1.61
FAM49B-223	ENST00000522746	KRTAP6-1	Q3LI64	71 aa		4.98	□□□□□ -1.61
FAM49B-223	ENST00000522746	MT1A	P04731	61 aa		4.96	□□□□□ -1.62
FAM49B-223	ENST00000522746	KRTAP20-1	Q3LI63	56 aa		4.85	□□□□□ -1.63
FAM49B-223	ENST00000522746	SYNE1	Q8NF91	8797 aa	Known RBP	4.83	□□□□□ -1.64
FAM49B-223	ENST00000522746	KRTAP5-4	Q6L8H1	288 aa		4.66	□□□□□ -1.66
FAM49B-223	ENST00000522746	KRTAP12-4	P60329	112 aa		4.62	□□□□□ -1.67
FAM49B-223	ENST00000522746	KRTAP2-2	Q9BYT5	123 aa		4.6	□□□□□ -1.67
FAM49B-223	ENST00000522746	MT4	P47944	62 aa		4.58	□□□□□ -1.68
FAM49B-223	ENST00000522746	KRTAP6-2	Q3LI66	62 aa		4.54	□□□□□ -1.68
FAM49B-223	ENST00000522746	LCE3D	Q9BYE3	92 aa		4.52	□□□□□ -1.69
FAM49B-223	ENST00000522746	MT3	P25713	68 aa		4.47	□□□□□ -1.69
FAM49B-223	ENST00000522746	HMCN1	Q96RW7	5635 aa		4.45	□□□□□ -1.7
FAM49B-223	ENST00000522746	LCE3E	Q5T5B0	92 aa		4.42	□□□□□ -1.7
FAM49B-223	ENST00000522746	KRTAP20-2	Q3LI61	65 aa		4.4	□□□□□ -1.71
FAM49B-223	ENST00000522746	OBSCN	Q5VST9	7968 aa		4.32	□□□□□ -1.72
FAM49B-223	ENST00000522746	KRTAP5-2	Q701N4	177 aa		4.25	□□□□□ -1.73
FAM49B-223	ENST00000522746	PRM1	P04553	51 aa		4.04	□□□□□ -1.76
FAM49B-223	ENST00000522746	GPR98	Q8WXG9	6306 aa		4.02	□□□□□ -1.77
FAM49B-223	ENST00000522746	AHNAK2	Q8IVF2	5795 aa		3.85	□□□□□ -1.79
FAM49B-223	ENST00000522746	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.83	□□□□□ -1.8
FAM49B-223	ENST00000522746	KRTAP5-10	Q6L8G5	202 aa		3.8	□□□□□ -1.8
FAM49B-223	ENST00000522746	LCE1E	Q5T753	118 aa		3.77	□□□□□ -1.81
FAM49B-223	ENST00000522746	KRTAP5-1	Q6L8H4	278 aa		3.7	□□□□□ -1.82
FAM49B-223	ENST00000522746	MUC5AC	P98088	5654 aa		3.7	□□□□□ -1.82
FAM49B-223	ENST00000522746	LCE1B	Q5T7P3	118 aa		3.68	□□□□□ -1.82
FAM49B-223	ENST00000522746	KRTAP5-7	Q6L8G8	165 aa		3.68	□□□□□ -1.82
FAM49B-223	ENST00000522746	KRTAP5-11	Q6L8G4	156 aa		3.65	□□□□□ -1.83
FAM49B-223	ENST00000522746	KRTAP5-8	O75690	187 aa		3.64	□□□□□ -1.83
FAM49B-223	ENST00000522746	LCE1C	Q5T751	118 aa		3.55	□□□□□ -1.84
FAM49B-223	ENST00000522746	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.25	□□□□□ -1.89
FAM49B-223	ENST00000522746	KRTAP21-2	Q3LI59	83 aa		3.24	□□□□□ -1.89
FAM49B-223	ENST00000522746	KRTAP4-4	Q9BYR3	166 aa		3.2	□□□□□ -1.9
FAM49B-223	ENST00000522746	AHNAK	Q09666	5890 aa	Known RBP	3.15	□□□□□ -1.9
FAM49B-223	ENST00000522746	PHGR1	C9JFL3	82 aa		2.68	□□□□□ -1.98
FAM49B-223	ENST00000522746	LCE1F	Q5T754	118 aa		2.67	□□□□□ -1.98
FAM49B-223	ENST00000522746	MUC19	Q7Z5P9	8384 aa		2.56	□□□□□ -2
FAM49B-223	ENST00000522746	KRTAP21-1	Q3LI58	79 aa		2.49	□□□□□ -2.01
FAM49B-223	ENST00000522746	MUC16	Q8WXI7	14507 aa		1.75	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 304.1 ms