RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 V9GYY9 64 aa6.33□□□□□ -1.4
CLK4-211ENST00000522556 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
CLK4-211ENST00000522556 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
CLK4-211ENST00000522556 PCP4P48539 62 aa6.24□□□□□ -1.41
CLK4-211ENST00000522556 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
CLK4-211ENST00000522556 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
CLK4-211ENST00000522556 K7ERS5 55 aa6.18□□□□□ -1.42
CLK4-211ENST00000522556 A6NED7 52 aa6.17□□□□□ -1.42
CLK4-211ENST00000522556 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
CLK4-211ENST00000522556 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
CLK4-211ENST00000522556 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
CLK4-211ENST00000522556 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
CLK4-211ENST00000522556 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
CLK4-211ENST00000522556 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
CLK4-211ENST00000522556 H3BS24 57 aa5.99□□□□□ -1.45
CLK4-211ENST00000522556 MT4P47944 62 aa5.96□□□□□ -1.46
CLK4-211ENST00000522556 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
CLK4-211ENST00000522556 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CLK4-211ENST00000522556 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
CLK4-211ENST00000522556 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
CLK4-211ENST00000522556 ROMO1P60602 79 aa5.87□□□□□ -1.47
CLK4-211ENST00000522556 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
CLK4-211ENST00000522556 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
CLK4-211ENST00000522556 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
CLK4-211ENST00000522556 HMCN1Q96RW7 5635 aa5.81□□□□□ -1.48
CLK4-211ENST00000522556 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
CLK4-211ENST00000522556 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
CLK4-211ENST00000522556 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
CLK4-211ENST00000522556 GPR98Q8WXG9 6306 aa5.67□□□□□ -1.5
CLK4-211ENST00000522556 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
CLK4-211ENST00000522556 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
CLK4-211ENST00000522556 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
CLK4-211ENST00000522556 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
CLK4-211ENST00000522556 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
CLK4-211ENST00000522556 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
CLK4-211ENST00000522556 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
CLK4-211ENST00000522556 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
CLK4-211ENST00000522556 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
CLK4-211ENST00000522556 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
CLK4-211ENST00000522556 MT1AP04731 61 aa5.41□□□□□ -1.54
CLK4-211ENST00000522556 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
CLK4-211ENST00000522556 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CLK4-211ENST00000522556 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
CLK4-211ENST00000522556 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
CLK4-211ENST00000522556 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
CLK4-211ENST00000522556 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
CLK4-211ENST00000522556 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
CLK4-211ENST00000522556 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
CLK4-211ENST00000522556 MT3P25713 68 aa4.89□□□□□ -1.63
CLK4-211ENST00000522556 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
CLK4-211ENST00000522556 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
CLK4-211ENST00000522556 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
CLK4-211ENST00000522556 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
CLK4-211ENST00000522556 KTN1-AS1Q86SY8 53 aa4.57□□□□□ -1.68
CLK4-211ENST00000522556 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
CLK4-211ENST00000522556 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
CLK4-211ENST00000522556 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
CLK4-211ENST00000522556 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
CLK4-211ENST00000522556 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CLK4-211ENST00000522556 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
CLK4-211ENST00000522556 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
CLK4-211ENST00000522556 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
CLK4-211ENST00000522556 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
CLK4-211ENST00000522556 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
CLK4-211ENST00000522556 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
CLK4-211ENST00000522556 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CLK4-211ENST00000522556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
CLK4-211ENST00000522556 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CLK4-211ENST00000522556 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
CLK4-211ENST00000522556 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CLK4-211ENST00000522556 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CLK4-211ENST00000522556 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
CLK4-211ENST00000522556 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
CLK4-211ENST00000522556 PRM1P04553 51 aa3.07□□□□□ -1.92
CLK4-211ENST00000522556 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
CLK4-211ENST00000522556 INE1O15225 51 aa2.63□□□□□ -1.99
CLK4-211ENST00000522556 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
CLK4-211ENST00000522556 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 38.6 ms