RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
LSS-211ENST00000522411 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
LSS-211ENST00000522411 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
LSS-211ENST00000522411 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
LSS-211ENST00000522411 MT1LQ93083 61 aa4.91□□□□□ -1.62
LSS-211ENST00000522411 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
LSS-211ENST00000522411 MT1EP04732 61 aa4.88□□□□□ -1.63
LSS-211ENST00000522411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
LSS-211ENST00000522411 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
LSS-211ENST00000522411 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
LSS-211ENST00000522411 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
LSS-211ENST00000522411 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
LSS-211ENST00000522411 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
LSS-211ENST00000522411 MT1GP13640 62 aa4.65□□□□□ -1.66
LSS-211ENST00000522411 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
LSS-211ENST00000522411 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
LSS-211ENST00000522411 MT1MQ8N339 61 aa4.55□□□□□ -1.68
LSS-211ENST00000522411 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
LSS-211ENST00000522411 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
LSS-211ENST00000522411 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
LSS-211ENST00000522411 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
LSS-211ENST00000522411 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
LSS-211ENST00000522411 SPRR2EP22531 72 aa4.43□□□□□ -1.7
LSS-211ENST00000522411 SPRR2BP35325 72 aa4.43□□□□□ -1.7
LSS-211ENST00000522411 SPRR2AP35326 72 aa4.43□□□□□ -1.7
LSS-211ENST00000522411 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
LSS-211ENST00000522411 NEBP20929 6669 aa4.34□□□□□ -1.71
LSS-211ENST00000522411 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
LSS-211ENST00000522411 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
LSS-211ENST00000522411 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
LSS-211ENST00000522411 SPRR2DP22532 72 aa4.25□□□□□ -1.73
LSS-211ENST00000522411 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
LSS-211ENST00000522411 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
LSS-211ENST00000522411 MT1AP04731 61 aa4.15□□□□□ -1.74
LSS-211ENST00000522411 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
LSS-211ENST00000522411 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
LSS-211ENST00000522411 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
LSS-211ENST00000522411 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
LSS-211ENST00000522411 PRM1P04553 51 aa3.96□□□□□ -1.78
LSS-211ENST00000522411 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
LSS-211ENST00000522411 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
LSS-211ENST00000522411 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
LSS-211ENST00000522411 MT4P47944 62 aa3.79□□□□□ -1.8
LSS-211ENST00000522411 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
LSS-211ENST00000522411 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
LSS-211ENST00000522411 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
LSS-211ENST00000522411 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
LSS-211ENST00000522411 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
LSS-211ENST00000522411 MT3P25713 68 aa3.67□□□□□ -1.82
LSS-211ENST00000522411 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
LSS-211ENST00000522411 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
LSS-211ENST00000522411 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
LSS-211ENST00000522411 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
LSS-211ENST00000522411 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
LSS-211ENST00000522411 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
LSS-211ENST00000522411 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
LSS-211ENST00000522411 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
LSS-211ENST00000522411 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
LSS-211ENST00000522411 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
LSS-211ENST00000522411 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
LSS-211ENST00000522411 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
LSS-211ENST00000522411 KRTAP5-8O75690 187 aa3□□□□□ -1.93
LSS-211ENST00000522411 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
LSS-211ENST00000522411 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
LSS-211ENST00000522411 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
LSS-211ENST00000522411 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
LSS-211ENST00000522411 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
LSS-211ENST00000522411 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
LSS-211ENST00000522411 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
LSS-211ENST00000522411 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
LSS-211ENST00000522411 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
LSS-211ENST00000522411 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
LSS-211ENST00000522411 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
LSS-211ENST00000522411 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
LSS-211ENST00000522411 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
LSS-211ENST00000522411 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
LSS-211ENST00000522411 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 29.5 ms