RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 FAT4Q6V0I7 4981 aa1.21□□□□□ -2.22
CKS1BP7-201ENST00000522230 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
CKS1BP7-201ENST00000522230 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
CKS1BP7-201ENST00000522230 CRIPTQ9P021 101 aa1.2□□□□□ -2.22
CKS1BP7-201ENST00000522230 MT1HP80294 61 aa1.19□□□□□ -2.22
CKS1BP7-201ENST00000522230 A6NN06 94 aa1.18□□□□□ -2.22
CKS1BP7-201ENST00000522230 MUC2Q02817 5179 aa1.17□□□□□ -2.22
CKS1BP7-201ENST00000522230 KRTAP6-3Q3LI67 103 aa1.17□□□□□ -2.22
CKS1BP7-201ENST00000522230 MT2AP02795 61 aa1.16□□□□□ -2.22
CKS1BP7-201ENST00000522230 MT1FP04733 61 aa1.16□□□□□ -2.22
CKS1BP7-201ENST00000522230 KRTAP12-1P59990 96 aa1.16□□□□□ -2.22
CKS1BP7-201ENST00000522230 KRTAP12-3P60328 96 aa1.15□□□□□ -2.23
CKS1BP7-201ENST00000522230 FLGP20930 4061 aaPredicted RBP1.15□□□□□ -2.23
CKS1BP7-201ENST00000522230 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
CKS1BP7-201ENST00000522230 KTN1-AS1Q86SY8 53 aa1.13□□□□□ -2.23
CKS1BP7-201ENST00000522230 ROMO1P60602 79 aa1.12□□□□□ -2.23
CKS1BP7-201ENST00000522230 PLAC4Q8WY50 150 aa1.1□□□□□ -2.23
CKS1BP7-201ENST00000522230 MT1BP07438 61 aa1.09□□□□□ -2.23
CKS1BP7-201ENST00000522230 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.23
CKS1BP7-201ENST00000522230 SPRR2GQ9BYE4 73 aa1.08□□□□□ -2.24
CKS1BP7-201ENST00000522230 PRO2289Q9P1D8 64 aa1.08□□□□□ -2.24
CKS1BP7-201ENST00000522230 MT1XP80297 61 aa1.06□□□□□ -2.24
CKS1BP7-201ENST00000522230 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
CKS1BP7-201ENST00000522230 KRTAP12-4P60329 112 aa1.05□□□□□ -2.24
CKS1BP7-201ENST00000522230 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
CKS1BP7-201ENST00000522230 USH2AO75445 5202 aa1.04□□□□□ -2.24
CKS1BP7-201ENST00000522230 TNP1P09430 55 aa1.04□□□□□ -2.24
CKS1BP7-201ENST00000522230 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
CKS1BP7-201ENST00000522230 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
CKS1BP7-201ENST00000522230 SSPOA2VEC9 5147 aa1.02□□□□□ -2.25
CKS1BP7-201ENST00000522230 SYNE2Q8WXH0 6885 aaKnown RBP1□□□□□ -2.25
CKS1BP7-201ENST00000522230 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
CKS1BP7-201ENST00000522230 NEBP20929 6669 aa0.98□□□□□ -2.25
CKS1BP7-201ENST00000522230 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
CKS1BP7-201ENST00000522230 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.26
CKS1BP7-201ENST00000522230 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
CKS1BP7-201ENST00000522230 KMT2DO14686 5537 aa0.96□□□□□ -2.26
CKS1BP7-201ENST00000522230 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
CKS1BP7-201ENST00000522230 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
CKS1BP7-201ENST00000522230 MACF1Q9UPN3 7388 aaKnown RBP0.93□□□□□ -2.26
CKS1BP7-201ENST00000522230 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
CKS1BP7-201ENST00000522230 MT1EP04732 61 aa0.92□□□□□ -2.26
CKS1BP7-201ENST00000522230 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
CKS1BP7-201ENST00000522230 MT1LQ93083 61 aa0.91□□□□□ -2.26
CKS1BP7-201ENST00000522230 MUC12Q9UKN1 5478 aa0.91□□□□□ -2.26
CKS1BP7-201ENST00000522230 SPRR2EP22531 72 aa0.88□□□□□ -2.27
CKS1BP7-201ENST00000522230 SPRR2BP35325 72 aa0.88□□□□□ -2.27
CKS1BP7-201ENST00000522230 SPRR2AP35326 72 aa0.88□□□□□ -2.27
CKS1BP7-201ENST00000522230 KRTAP5-8O75690 187 aa0.87□□□□□ -2.27
CKS1BP7-201ENST00000522230 MT1GP13640 62 aa0.87□□□□□ -2.27
CKS1BP7-201ENST00000522230 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
CKS1BP7-201ENST00000522230 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
CKS1BP7-201ENST00000522230 MT1MQ8N339 61 aa0.87□□□□□ -2.27
CKS1BP7-201ENST00000522230 INE1O15225 51 aa0.86□□□□□ -2.27
CKS1BP7-201ENST00000522230 SPRR2DP22532 72 aa0.84□□□□□ -2.27
CKS1BP7-201ENST00000522230 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
CKS1BP7-201ENST00000522230 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
CKS1BP7-201ENST00000522230 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
CKS1BP7-201ENST00000522230 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.28
CKS1BP7-201ENST00000522230 KRTAP6-1Q3LI64 71 aa0.78□□□□□ -2.28
CKS1BP7-201ENST00000522230 MT1AP04731 61 aa0.76□□□□□ -2.29
CKS1BP7-201ENST00000522230 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
CKS1BP7-201ENST00000522230 MT4P47944 62 aa0.76□□□□□ -2.29
CKS1BP7-201ENST00000522230 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
CKS1BP7-201ENST00000522230 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
CKS1BP7-201ENST00000522230 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
CKS1BP7-201ENST00000522230 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
CKS1BP7-201ENST00000522230 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
CKS1BP7-201ENST00000522230 HMCN1Q96RW7 5635 aa0.71□□□□□ -2.3
CKS1BP7-201ENST00000522230 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
CKS1BP7-201ENST00000522230 KRTAP20-2Q3LI61 65 aa0.68□□□□□ -2.3
CKS1BP7-201ENST00000522230 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
CKS1BP7-201ENST00000522230 MUC5ACP98088 5654 aa0.65□□□□□ -2.3
CKS1BP7-201ENST00000522230 PRM1P04553 51 aa0.62□□□□□ -2.31
CKS1BP7-201ENST00000522230 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
CKS1BP7-201ENST00000522230 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CKS1BP7-201ENST00000522230 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 100.6 ms