RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-208ENST00000522039 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
HR-208ENST00000522039 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
HR-208ENST00000522039 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
HR-208ENST00000522039 MT1LQ93083 61 aa6.19□□□□□ -1.42
HR-208ENST00000522039 K7ERS5 55 aa6.16□□□□□ -1.42
HR-208ENST00000522039 MT1MQ8N339 61 aa6.15□□□□□ -1.42
HR-208ENST00000522039 DSTQ03001 7570 aaKnown RBP6.14□□□□□ -1.43
HR-208ENST00000522039 A6NED7 52 aa6.12□□□□□ -1.43
HR-208ENST00000522039 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
HR-208ENST00000522039 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
HR-208ENST00000522039 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
HR-208ENST00000522039 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
HR-208ENST00000522039 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
HR-208ENST00000522039 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
HR-208ENST00000522039 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
HR-208ENST00000522039 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
HR-208ENST00000522039 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
HR-208ENST00000522039 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
HR-208ENST00000522039 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
HR-208ENST00000522039 MT4P47944 62 aa5.82□□□□□ -1.48
HR-208ENST00000522039 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
HR-208ENST00000522039 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
HR-208ENST00000522039 ROMO1P60602 79 aa5.75□□□□□ -1.49
HR-208ENST00000522039 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
HR-208ENST00000522039 KRTAP5-10Q6L8G5 202 aa5.66□□□□□ -1.5
HR-208ENST00000522039 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
HR-208ENST00000522039 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
HR-208ENST00000522039 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
HR-208ENST00000522039 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
HR-208ENST00000522039 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
HR-208ENST00000522039 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
HR-208ENST00000522039 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
HR-208ENST00000522039 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
HR-208ENST00000522039 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
HR-208ENST00000522039 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
HR-208ENST00000522039 MT1AP04731 61 aa5.29□□□□□ -1.56
HR-208ENST00000522039 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
HR-208ENST00000522039 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
HR-208ENST00000522039 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
HR-208ENST00000522039 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
HR-208ENST00000522039 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
HR-208ENST00000522039 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
HR-208ENST00000522039 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
HR-208ENST00000522039 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
HR-208ENST00000522039 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
HR-208ENST00000522039 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
HR-208ENST00000522039 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
HR-208ENST00000522039 AHNAKQ09666 5890 aaKnown RBP4.91□□□□□ -1.62
HR-208ENST00000522039 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
HR-208ENST00000522039 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
HR-208ENST00000522039 MT3P25713 68 aa4.83□□□□□ -1.64
HR-208ENST00000522039 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
HR-208ENST00000522039 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
HR-208ENST00000522039 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
HR-208ENST00000522039 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
HR-208ENST00000522039 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
HR-208ENST00000522039 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
HR-208ENST00000522039 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
HR-208ENST00000522039 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
HR-208ENST00000522039 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
HR-208ENST00000522039 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
HR-208ENST00000522039 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
HR-208ENST00000522039 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
HR-208ENST00000522039 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
HR-208ENST00000522039 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
HR-208ENST00000522039 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
HR-208ENST00000522039 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
HR-208ENST00000522039 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
HR-208ENST00000522039 H3BS24 57 aa3.57□□□□□ -1.84
HR-208ENST00000522039 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
HR-208ENST00000522039 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
HR-208ENST00000522039 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
HR-208ENST00000522039 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
HR-208ENST00000522039 INE1O15225 51 aa2.96□□□□□ -1.94
HR-208ENST00000522039 PRM1P04553 51 aa2.94□□□□□ -1.94
HR-208ENST00000522039 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
HR-208ENST00000522039 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
HR-208ENST00000522039 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms