RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
CTNNA1-230ENST00000521724 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
CTNNA1-230ENST00000521724 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
CTNNA1-230ENST00000521724 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
CTNNA1-230ENST00000521724 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
CTNNA1-230ENST00000521724 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
CTNNA1-230ENST00000521724 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CTNNA1-230ENST00000521724 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
CTNNA1-230ENST00000521724 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
CTNNA1-230ENST00000521724 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
CTNNA1-230ENST00000521724 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
CTNNA1-230ENST00000521724 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CTNNA1-230ENST00000521724 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
CTNNA1-230ENST00000521724 MT1LQ93083 61 aa3.17□□□□□ -1.9
CTNNA1-230ENST00000521724 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
CTNNA1-230ENST00000521724 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.9
CTNNA1-230ENST00000521724 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-230ENST00000521724 MT1EP04732 61 aa3.13□□□□□ -1.91
CTNNA1-230ENST00000521724 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
CTNNA1-230ENST00000521724 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
CTNNA1-230ENST00000521724 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
CTNNA1-230ENST00000521724 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
CTNNA1-230ENST00000521724 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
CTNNA1-230ENST00000521724 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
CTNNA1-230ENST00000521724 MT1GP13640 62 aa3.02□□□□□ -1.93
CTNNA1-230ENST00000521724 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
CTNNA1-230ENST00000521724 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
CTNNA1-230ENST00000521724 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
CTNNA1-230ENST00000521724 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
CTNNA1-230ENST00000521724 MT1MQ8N339 61 aa2.92□□□□□ -1.94
CTNNA1-230ENST00000521724 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
CTNNA1-230ENST00000521724 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
CTNNA1-230ENST00000521724 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
CTNNA1-230ENST00000521724 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
CTNNA1-230ENST00000521724 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
CTNNA1-230ENST00000521724 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
CTNNA1-230ENST00000521724 PRM1P04553 51 aa2.82□□□□□ -1.96
CTNNA1-230ENST00000521724 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
CTNNA1-230ENST00000521724 MT1AP04731 61 aa2.82□□□□□ -1.96
CTNNA1-230ENST00000521724 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-230ENST00000521724 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
CTNNA1-230ENST00000521724 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
CTNNA1-230ENST00000521724 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
CTNNA1-230ENST00000521724 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
CTNNA1-230ENST00000521724 SPRR2EP22531 72 aa2.6□□□□□ -1.99
CTNNA1-230ENST00000521724 SPRR2BP35325 72 aa2.6□□□□□ -1.99
CTNNA1-230ENST00000521724 SPRR2AP35326 72 aa2.6□□□□□ -1.99
CTNNA1-230ENST00000521724 KRTAP5-9P26371 169 aa2.56□□□□□ -2
CTNNA1-230ENST00000521724 NEBP20929 6669 aa2.53□□□□□ -2
CTNNA1-230ENST00000521724 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
CTNNA1-230ENST00000521724 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
CTNNA1-230ENST00000521724 SPRR2DP22532 72 aa2.47□□□□□ -2.01
CTNNA1-230ENST00000521724 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
CTNNA1-230ENST00000521724 MT4P47944 62 aa2.26□□□□□ -2.05
CTNNA1-230ENST00000521724 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
CTNNA1-230ENST00000521724 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
CTNNA1-230ENST00000521724 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
CTNNA1-230ENST00000521724 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
CTNNA1-230ENST00000521724 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CTNNA1-230ENST00000521724 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CTNNA1-230ENST00000521724 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CTNNA1-230ENST00000521724 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
CTNNA1-230ENST00000521724 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CTNNA1-230ENST00000521724 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
CTNNA1-230ENST00000521724 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
CTNNA1-230ENST00000521724 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
CTNNA1-230ENST00000521724 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
CTNNA1-230ENST00000521724 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
CTNNA1-230ENST00000521724 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CTNNA1-230ENST00000521724 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
CTNNA1-230ENST00000521724 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CTNNA1-230ENST00000521724 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
CTNNA1-230ENST00000521724 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
CTNNA1-230ENST00000521724 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
CTNNA1-230ENST00000521724 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
CTNNA1-230ENST00000521724 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
CTNNA1-230ENST00000521724 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CTNNA1-230ENST00000521724 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 56.8 ms