RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
TRAPPC9-211ENST00000521700 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
TRAPPC9-211ENST00000521700 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
TRAPPC9-211ENST00000521700 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
TRAPPC9-211ENST00000521700 PSPHP1O15172 72 aa6.16□□□□□ -1.42
TRAPPC9-211ENST00000521700 V9GYY9 64 aa6.16□□□□□ -1.42
TRAPPC9-211ENST00000521700 Q1T7F1 81 aa6.15□□□□□ -1.42
TRAPPC9-211ENST00000521700 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
TRAPPC9-211ENST00000521700 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
TRAPPC9-211ENST00000521700 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
TRAPPC9-211ENST00000521700 K7ERS5 55 aa6.1□□□□□ -1.43
TRAPPC9-211ENST00000521700 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
TRAPPC9-211ENST00000521700 MT4P47944 62 aa6.04□□□□□ -1.44
TRAPPC9-211ENST00000521700 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
TRAPPC9-211ENST00000521700 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
TRAPPC9-211ENST00000521700 A6NED7 52 aa5.94□□□□□ -1.46
TRAPPC9-211ENST00000521700 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
TRAPPC9-211ENST00000521700 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
TRAPPC9-211ENST00000521700 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
TRAPPC9-211ENST00000521700 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
TRAPPC9-211ENST00000521700 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
TRAPPC9-211ENST00000521700 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC9-211ENST00000521700 KRTAP5-10Q6L8G5 202 aa5.8□□□□□ -1.48
TRAPPC9-211ENST00000521700 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
TRAPPC9-211ENST00000521700 CDC42SE1Q9NRR8 79 aa5.79□□□□□ -1.48
TRAPPC9-211ENST00000521700 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
TRAPPC9-211ENST00000521700 PCP4P48539 62 aa5.76□□□□□ -1.49
TRAPPC9-211ENST00000521700 ROMO1P60602 79 aa5.72□□□□□ -1.49
TRAPPC9-211ENST00000521700 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
TRAPPC9-211ENST00000521700 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
TRAPPC9-211ENST00000521700 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
TRAPPC9-211ENST00000521700 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
TRAPPC9-211ENST00000521700 KRTAP5-7Q6L8G8 165 aa5.63□□□□□ -1.51
TRAPPC9-211ENST00000521700 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
TRAPPC9-211ENST00000521700 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
TRAPPC9-211ENST00000521700 MT1AP04731 61 aa5.41□□□□□ -1.54
TRAPPC9-211ENST00000521700 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
TRAPPC9-211ENST00000521700 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
TRAPPC9-211ENST00000521700 KRTAP5-2Q701N4 177 aa5.28□□□□□ -1.56
TRAPPC9-211ENST00000521700 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
TRAPPC9-211ENST00000521700 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
TRAPPC9-211ENST00000521700 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
TRAPPC9-211ENST00000521700 BRK1Q8WUW1 75 aa5.11□□□□□ -1.59
TRAPPC9-211ENST00000521700 KRTAP5-8O75690 187 aa5.01□□□□□ -1.61
TRAPPC9-211ENST00000521700 MT3P25713 68 aa4.95□□□□□ -1.62
TRAPPC9-211ENST00000521700 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
TRAPPC9-211ENST00000521700 AHNAKQ09666 5890 aaKnown RBP4.88□□□□□ -1.63
TRAPPC9-211ENST00000521700 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
TRAPPC9-211ENST00000521700 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC9-211ENST00000521700 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
TRAPPC9-211ENST00000521700 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
TRAPPC9-211ENST00000521700 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
TRAPPC9-211ENST00000521700 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
TRAPPC9-211ENST00000521700 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
TRAPPC9-211ENST00000521700 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
TRAPPC9-211ENST00000521700 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
TRAPPC9-211ENST00000521700 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
TRAPPC9-211ENST00000521700 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
TRAPPC9-211ENST00000521700 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
TRAPPC9-211ENST00000521700 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
TRAPPC9-211ENST00000521700 SVIPQ8NHG7 77 aa4.06□□□□□ -1.76
TRAPPC9-211ENST00000521700 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
TRAPPC9-211ENST00000521700 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TRAPPC9-211ENST00000521700 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
TRAPPC9-211ENST00000521700 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC9-211ENST00000521700 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
TRAPPC9-211ENST00000521700 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
TRAPPC9-211ENST00000521700 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
TRAPPC9-211ENST00000521700 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
TRAPPC9-211ENST00000521700 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
TRAPPC9-211ENST00000521700 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
TRAPPC9-211ENST00000521700 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
TRAPPC9-211ENST00000521700 PRM1P04553 51 aa2.93□□□□□ -1.94
TRAPPC9-211ENST00000521700 H3BS24 57 aa2.83□□□□□ -1.96
TRAPPC9-211ENST00000521700 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
TRAPPC9-211ENST00000521700 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
TRAPPC9-211ENST00000521700 INE1O15225 51 aa2.46□□□□□ -2.02
TRAPPC9-211ENST00000521700 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 200.8 ms