RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KRTAP19-8Q3LI54 63 aa1.35□□□□□ -2.19
VPS13B-209ENST00000521559 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
VPS13B-209ENST00000521559 MT1BP07438 61 aa1.33□□□□□ -2.2
VPS13B-209ENST00000521559 Q5VV11 94 aa1.33□□□□□ -2.2
VPS13B-209ENST00000521559 SERP1Q9Y6X1 66 aa1.33□□□□□ -2.2
VPS13B-209ENST00000521559 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
VPS13B-209ENST00000521559 FLGP20930 4061 aaPredicted RBP1.33□□□□□ -2.2
VPS13B-209ENST00000521559 M0QZ58 72 aa1.32□□□□□ -2.2
VPS13B-209ENST00000521559 KRTAP19-6Q3LI70 58 aa1.32□□□□□ -2.2
VPS13B-209ENST00000521559 A0A1B0GU69 56 aa1.31□□□□□ -2.2
VPS13B-209ENST00000521559 LINC01554Q52M75 96 aa1.3□□□□□ -2.2
VPS13B-209ENST00000521559 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
VPS13B-209ENST00000521559 LINC01558Q9Y6Z2 57 aa1.3□□□□□ -2.2
VPS13B-209ENST00000521559 A6NN06 94 aa1.29□□□□□ -2.2
VPS13B-209ENST00000521559 RPS28P62857 69 aaKnown RBP1.29□□□□□ -2.2
VPS13B-209ENST00000521559 KRTAP13-4Q3LI77 160 aa1.29□□□□□ -2.2
VPS13B-209ENST00000521559 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
VPS13B-209ENST00000521559 A0A0D9SG42 100 aa1.27□□□□□ -2.21
VPS13B-209ENST00000521559 Q1T7F1 81 aa1.27□□□□□ -2.21
VPS13B-209ENST00000521559 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
VPS13B-209ENST00000521559 PRO2289Q9P1D8 64 aa1.27□□□□□ -2.21
VPS13B-209ENST00000521559 MT1XP80297 61 aa1.26□□□□□ -2.21
VPS13B-209ENST00000521559 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
VPS13B-209ENST00000521559 UQCR11O14957 56 aa1.25□□□□□ -2.21
VPS13B-209ENST00000521559 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
VPS13B-209ENST00000521559 MIR22HGQ0VDD5 57 aa1.23□□□□□ -2.21
VPS13B-209ENST00000521559 FSIP2Q5CZC0 6907 aa1.21□□□□□ -2.22
VPS13B-209ENST00000521559 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
VPS13B-209ENST00000521559 KRTAP8-1Q8IUC2 63 aa1.18□□□□□ -2.22
VPS13B-209ENST00000521559 TNP1P09430 55 aa1.17□□□□□ -2.22
VPS13B-209ENST00000521559 CDC42SE1Q9NRR8 79 aa1.17□□□□□ -2.22
VPS13B-209ENST00000521559 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
VPS13B-209ENST00000521559 USH2AO75445 5202 aa1.14□□□□□ -2.23
VPS13B-209ENST00000521559 SSPOA2VEC9 5147 aa1.13□□□□□ -2.23
VPS13B-209ENST00000521559 ROMO1P60602 79 aa1.13□□□□□ -2.23
VPS13B-209ENST00000521559 KRTAP19-7Q3SYF9 63 aa1.13□□□□□ -2.23
VPS13B-209ENST00000521559 FCGBPQ9Y6R7 5405 aaPredicted RBP1.13□□□□□ -2.23
VPS13B-209ENST00000521559 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
VPS13B-209ENST00000521559 SPRR2EP22531 72 aa1.12□□□□□ -2.23
VPS13B-209ENST00000521559 SPRR2BP35325 72 aa1.12□□□□□ -2.23
VPS13B-209ENST00000521559 SPRR2AP35326 72 aa1.12□□□□□ -2.23
VPS13B-209ENST00000521559 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
VPS13B-209ENST00000521559 BRK1Q8WUW1 75 aa1.12□□□□□ -2.23
VPS13B-209ENST00000521559 MT1EP04732 61 aa1.11□□□□□ -2.23
VPS13B-209ENST00000521559 KTN1-AS1Q86SY8 53 aa1.1□□□□□ -2.23
VPS13B-209ENST00000521559 KRTAP19-3Q7Z4W3 81 aa1.09□□□□□ -2.23
VPS13B-209ENST00000521559 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
VPS13B-209ENST00000521559 MT1GP13640 62 aa1.08□□□□□ -2.24
VPS13B-209ENST00000521559 SPRR2DP22532 72 aa1.08□□□□□ -2.24
VPS13B-209ENST00000521559 MT1LQ93083 61 aa1.08□□□□□ -2.24
VPS13B-209ENST00000521559 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
VPS13B-209ENST00000521559 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
VPS13B-209ENST00000521559 PMAIP1Q13794 54 aa1.07□□□□□ -2.24
VPS13B-209ENST00000521559 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
VPS13B-209ENST00000521559 MT1MQ8N339 61 aa1.05□□□□□ -2.24
VPS13B-209ENST00000521559 KRTAP2-1Q9BYU5 128 aa1.04□□□□□ -2.24
VPS13B-209ENST00000521559 NEBP20929 6669 aa1.04□□□□□ -2.24
VPS13B-209ENST00000521559 KMT2DO14686 5537 aa0.99□□□□□ -2.25
VPS13B-209ENST00000521559 MT4P47944 62 aa0.93□□□□□ -2.26
VPS13B-209ENST00000521559 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
VPS13B-209ENST00000521559 MT1AP04731 61 aa0.92□□□□□ -2.26
VPS13B-209ENST00000521559 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
VPS13B-209ENST00000521559 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
VPS13B-209ENST00000521559 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
VPS13B-209ENST00000521559 DSTQ03001 7570 aaKnown RBP0.86□□□□□ -2.27
VPS13B-209ENST00000521559 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
VPS13B-209ENST00000521559 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
VPS13B-209ENST00000521559 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
VPS13B-209ENST00000521559 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
VPS13B-209ENST00000521559 INE1O15225 51 aa0.78□□□□□ -2.28
VPS13B-209ENST00000521559 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
VPS13B-209ENST00000521559 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
VPS13B-209ENST00000521559 PRM1P04553 51 aa0.58□□□□□ -2.32
VPS13B-209ENST00000521559 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
VPS13B-209ENST00000521559 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
VPS13B-209ENST00000521559 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
VPS13B-209ENST00000521559 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
VPS13B-209ENST00000521559 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 155.6 ms