RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 TNP1P09430 55 aa6.88□□□□□ -1.31
PABPC1-217ENST00000521067 H7BZZ5 65 aa6.86□□□□□ -1.31
PABPC1-217ENST00000521067 COX7CP15954 63 aa6.84□□□□□ -1.31
PABPC1-217ENST00000521067 A0A1B0GU69 56 aa6.82□□□□□ -1.32
PABPC1-217ENST00000521067 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
PABPC1-217ENST00000521067 KRTAP5-7Q6L8G8 165 aa6.77□□□□□ -1.33
PABPC1-217ENST00000521067 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
PABPC1-217ENST00000521067 KRTAP20-2Q3LI61 65 aa6.71□□□□□ -1.34
PABPC1-217ENST00000521067 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
PABPC1-217ENST00000521067 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
PABPC1-217ENST00000521067 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
PABPC1-217ENST00000521067 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
PABPC1-217ENST00000521067 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
PABPC1-217ENST00000521067 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
PABPC1-217ENST00000521067 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
PABPC1-217ENST00000521067 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
PABPC1-217ENST00000521067 CCDC179H3BU77 68 aa6.35□□□□□ -1.39
PABPC1-217ENST00000521067 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
PABPC1-217ENST00000521067 UQCR11O14957 56 aa6.29□□□□□ -1.4
PABPC1-217ENST00000521067 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-217ENST00000521067 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
PABPC1-217ENST00000521067 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
PABPC1-217ENST00000521067 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
PABPC1-217ENST00000521067 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
PABPC1-217ENST00000521067 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
PABPC1-217ENST00000521067 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
PABPC1-217ENST00000521067 KRTAP6-1Q3LI64 71 aa6.12□□□□□ -1.43
PABPC1-217ENST00000521067 MT1AP04731 61 aa6.09□□□□□ -1.43
PABPC1-217ENST00000521067 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
PABPC1-217ENST00000521067 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
PABPC1-217ENST00000521067 AHNAKQ09666 5890 aaKnown RBP6.01□□□□□ -1.45
PABPC1-217ENST00000521067 K7ERS5 55 aa6□□□□□ -1.45
PABPC1-217ENST00000521067 MUC5BQ9HC84 5762 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-217ENST00000521067 TMEM258P61165 79 aa5.98□□□□□ -1.45
PABPC1-217ENST00000521067 MUC5ACP98088 5654 aa5.95□□□□□ -1.46
PABPC1-217ENST00000521067 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
PABPC1-217ENST00000521067 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
PABPC1-217ENST00000521067 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
PABPC1-217ENST00000521067 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
PABPC1-217ENST00000521067 PSPHP1O15172 72 aa5.85□□□□□ -1.47
PABPC1-217ENST00000521067 Q1T7F1 81 aa5.74□□□□□ -1.49
PABPC1-217ENST00000521067 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
PABPC1-217ENST00000521067 V9GYY9 64 aa5.71□□□□□ -1.5
PABPC1-217ENST00000521067 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
PABPC1-217ENST00000521067 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
PABPC1-217ENST00000521067 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
PABPC1-217ENST00000521067 ROMO1P60602 79 aa5.6□□□□□ -1.51
PABPC1-217ENST00000521067 A6NED7 52 aa5.58□□□□□ -1.52
PABPC1-217ENST00000521067 MT3P25713 68 aa5.58□□□□□ -1.52
PABPC1-217ENST00000521067 PCP4P48539 62 aa5.28□□□□□ -1.56
PABPC1-217ENST00000521067 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
PABPC1-217ENST00000521067 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
PABPC1-217ENST00000521067 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
PABPC1-217ENST00000521067 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
PABPC1-217ENST00000521067 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
PABPC1-217ENST00000521067 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
PABPC1-217ENST00000521067 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
PABPC1-217ENST00000521067 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
PABPC1-217ENST00000521067 PRO0628Q9UI54 55 aa4.36□□□□□ -1.71
PABPC1-217ENST00000521067 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
PABPC1-217ENST00000521067 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
PABPC1-217ENST00000521067 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
PABPC1-217ENST00000521067 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
PABPC1-217ENST00000521067 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
PABPC1-217ENST00000521067 PHGR1C9JFL3 82 aa4.08□□□□□ -1.76
PABPC1-217ENST00000521067 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
PABPC1-217ENST00000521067 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
PABPC1-217ENST00000521067 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
PABPC1-217ENST00000521067 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
PABPC1-217ENST00000521067 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
PABPC1-217ENST00000521067 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
PABPC1-217ENST00000521067 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PABPC1-217ENST00000521067 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
PABPC1-217ENST00000521067 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
PABPC1-217ENST00000521067 PRM1P04553 51 aa2.87□□□□□ -1.95
PABPC1-217ENST00000521067 H3BS24 57 aa2.86□□□□□ -1.95
PABPC1-217ENST00000521067 INE1O15225 51 aa2.75□□□□□ -1.97
PABPC1-217ENST00000521067 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms