RNA–Protein interactions for RNA: ENST00000520978.5

RUNX1T1-229, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-229ENST00000520978 UQCR11O14957 56 aa5.36□□□□□ -1.55
RUNX1T1-229ENST00000520978 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
RUNX1T1-229ENST00000520978 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
RUNX1T1-229ENST00000520978 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
RUNX1T1-229ENST00000520978 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
RUNX1T1-229ENST00000520978 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
RUNX1T1-229ENST00000520978 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
RUNX1T1-229ENST00000520978 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
RUNX1T1-229ENST00000520978 MT4P47944 62 aa5.21□□□□□ -1.58
RUNX1T1-229ENST00000520978 K7ERS5 55 aa5.16□□□□□ -1.58
RUNX1T1-229ENST00000520978 PSPHP1O15172 72 aa5.16□□□□□ -1.58
RUNX1T1-229ENST00000520978 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
RUNX1T1-229ENST00000520978 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
RUNX1T1-229ENST00000520978 V9GYY9 64 aa5.14□□□□□ -1.59
RUNX1T1-229ENST00000520978 H3BS24 57 aa5.12□□□□□ -1.59
RUNX1T1-229ENST00000520978 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
RUNX1T1-229ENST00000520978 Q1T7F1 81 aa5.08□□□□□ -1.6
RUNX1T1-229ENST00000520978 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
RUNX1T1-229ENST00000520978 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
RUNX1T1-229ENST00000520978 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
RUNX1T1-229ENST00000520978 A6NED7 52 aa4.99□□□□□ -1.61
RUNX1T1-229ENST00000520978 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
RUNX1T1-229ENST00000520978 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
RUNX1T1-229ENST00000520978 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
RUNX1T1-229ENST00000520978 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
RUNX1T1-229ENST00000520978 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
RUNX1T1-229ENST00000520978 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
RUNX1T1-229ENST00000520978 KRTAP5-10Q6L8G5 202 aa4.86□□□□□ -1.63
RUNX1T1-229ENST00000520978 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
RUNX1T1-229ENST00000520978 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
RUNX1T1-229ENST00000520978 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
RUNX1T1-229ENST00000520978 ROMO1P60602 79 aa4.8□□□□□ -1.64
RUNX1T1-229ENST00000520978 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
RUNX1T1-229ENST00000520978 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
RUNX1T1-229ENST00000520978 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
RUNX1T1-229ENST00000520978 PCP4P48539 62 aa4.71□□□□□ -1.66
RUNX1T1-229ENST00000520978 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
RUNX1T1-229ENST00000520978 MT1AP04731 61 aa4.61□□□□□ -1.67
RUNX1T1-229ENST00000520978 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
RUNX1T1-229ENST00000520978 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
RUNX1T1-229ENST00000520978 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
RUNX1T1-229ENST00000520978 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
RUNX1T1-229ENST00000520978 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
RUNX1T1-229ENST00000520978 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
RUNX1T1-229ENST00000520978 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
RUNX1T1-229ENST00000520978 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
RUNX1T1-229ENST00000520978 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
RUNX1T1-229ENST00000520978 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
RUNX1T1-229ENST00000520978 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
RUNX1T1-229ENST00000520978 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
RUNX1T1-229ENST00000520978 MT3P25713 68 aa4.21□□□□□ -1.74
RUNX1T1-229ENST00000520978 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
RUNX1T1-229ENST00000520978 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
RUNX1T1-229ENST00000520978 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
RUNX1T1-229ENST00000520978 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
RUNX1T1-229ENST00000520978 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
RUNX1T1-229ENST00000520978 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
RUNX1T1-229ENST00000520978 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
RUNX1T1-229ENST00000520978 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
RUNX1T1-229ENST00000520978 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
RUNX1T1-229ENST00000520978 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
RUNX1T1-229ENST00000520978 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
RUNX1T1-229ENST00000520978 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
RUNX1T1-229ENST00000520978 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
RUNX1T1-229ENST00000520978 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
RUNX1T1-229ENST00000520978 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
RUNX1T1-229ENST00000520978 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
RUNX1T1-229ENST00000520978 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
RUNX1T1-229ENST00000520978 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
RUNX1T1-229ENST00000520978 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
RUNX1T1-229ENST00000520978 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
RUNX1T1-229ENST00000520978 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
RUNX1T1-229ENST00000520978 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
RUNX1T1-229ENST00000520978 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
RUNX1T1-229ENST00000520978 PRM1P04553 51 aa2.47□□□□□ -2.01
RUNX1T1-229ENST00000520978 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
RUNX1T1-229ENST00000520978 INE1O15225 51 aa1.99□□□□□ -2.09
RUNX1T1-229ENST00000520978 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms