RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
MRPS28-206ENST00000520946 A0A1B0GV90 55 aa3.85□□□□□ -1.79
MRPS28-206ENST00000520946 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
MRPS28-206ENST00000520946 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
MRPS28-206ENST00000520946 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
MRPS28-206ENST00000520946 A0A1B0GU69 56 aa3.75□□□□□ -1.81
MRPS28-206ENST00000520946 A8MU10 97 aa3.74□□□□□ -1.81
MRPS28-206ENST00000520946 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
MRPS28-206ENST00000520946 K7ERU9 68 aa3.69□□□□□ -1.82
MRPS28-206ENST00000520946 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
MRPS28-206ENST00000520946 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
MRPS28-206ENST00000520946 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
MRPS28-206ENST00000520946 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
MRPS28-206ENST00000520946 KRTAP19-4Q3LI73 84 aa3.54□□□□□ -1.84
MRPS28-206ENST00000520946 COX7CP15954 63 aa3.52□□□□□ -1.85
MRPS28-206ENST00000520946 H7BZZ5 65 aa3.51□□□□□ -1.85
MRPS28-206ENST00000520946 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
MRPS28-206ENST00000520946 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
MRPS28-206ENST00000520946 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
MRPS28-206ENST00000520946 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
MRPS28-206ENST00000520946 MT1AP04731 61 aa3.44□□□□□ -1.86
MRPS28-206ENST00000520946 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
MRPS28-206ENST00000520946 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
MRPS28-206ENST00000520946 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
MRPS28-206ENST00000520946 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
MRPS28-206ENST00000520946 LCE3CQ5T5A8 94 aa3.43□□□□□ -1.86
MRPS28-206ENST00000520946 UQCR11O14957 56 aa3.4□□□□□ -1.87
MRPS28-206ENST00000520946 K7ERS5 55 aa3.39□□□□□ -1.87
MRPS28-206ENST00000520946 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
MRPS28-206ENST00000520946 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
MRPS28-206ENST00000520946 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
MRPS28-206ENST00000520946 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
MRPS28-206ENST00000520946 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
MRPS28-206ENST00000520946 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
MRPS28-206ENST00000520946 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
MRPS28-206ENST00000520946 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
MRPS28-206ENST00000520946 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
MRPS28-206ENST00000520946 MT3P25713 68 aa3.21□□□□□ -1.9
MRPS28-206ENST00000520946 RPS28P62857 69 aaKnown RBP3.19□□□□□ -1.9
MRPS28-206ENST00000520946 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
MRPS28-206ENST00000520946 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
MRPS28-206ENST00000520946 CCDC179H3BU77 68 aa3.15□□□□□ -1.91
MRPS28-206ENST00000520946 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
MRPS28-206ENST00000520946 PSPHP1O15172 72 aa3.05□□□□□ -1.92
MRPS28-206ENST00000520946 TMEM258P61165 79 aa3.04□□□□□ -1.92
MRPS28-206ENST00000520946 Q1T7F1 81 aa3.03□□□□□ -1.92
MRPS28-206ENST00000520946 V9GYY9 64 aa3.01□□□□□ -1.93
MRPS28-206ENST00000520946 ROMO1P60602 79 aa3□□□□□ -1.93
MRPS28-206ENST00000520946 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
MRPS28-206ENST00000520946 A6NED7 52 aa2.96□□□□□ -1.94
MRPS28-206ENST00000520946 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
MRPS28-206ENST00000520946 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
MRPS28-206ENST00000520946 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
MRPS28-206ENST00000520946 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
MRPS28-206ENST00000520946 H3BS24 57 aa2.61□□□□□ -1.99
MRPS28-206ENST00000520946 LCE1FQ5T754 118 aa2.54□□□□□ -2
MRPS28-206ENST00000520946 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
MRPS28-206ENST00000520946 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
MRPS28-206ENST00000520946 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
MRPS28-206ENST00000520946 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
MRPS28-206ENST00000520946 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
MRPS28-206ENST00000520946 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
MRPS28-206ENST00000520946 PCP4P48539 62 aa2.23□□□□□ -2.05
MRPS28-206ENST00000520946 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
MRPS28-206ENST00000520946 BRK1Q8WUW1 75 aa2.18□□□□□ -2.06
MRPS28-206ENST00000520946 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
MRPS28-206ENST00000520946 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
MRPS28-206ENST00000520946 PMAIP1Q13794 54 aa2.01□□□□□ -2.09
MRPS28-206ENST00000520946 PRAC1Q96KF2 57 aa1.98□□□□□ -2.09
MRPS28-206ENST00000520946 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
MRPS28-206ENST00000520946 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
MRPS28-206ENST00000520946 PRO0628Q9UI54 55 aa1.85□□□□□ -2.11
MRPS28-206ENST00000520946 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
MRPS28-206ENST00000520946 PRM1P04553 51 aa1.51□□□□□ -2.17
MRPS28-206ENST00000520946 A0A0A0MQY5 61 aa1.46□□□□□ -2.18
MRPS28-206ENST00000520946 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
MRPS28-206ENST00000520946 NDUFAF8A1L188 74 aa1.31□□□□□ -2.2
MRPS28-206ENST00000520946 INE1O15225 51 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 35.6 ms