RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 A6NED7 52 aa1.7□□□□□ -2.14
CLK4-207ENST00000520909 MT2AP02795 61 aa1.69□□□□□ -2.14
CLK4-207ENST00000520909 M0QZ58 72 aa1.68□□□□□ -2.14
CLK4-207ENST00000520909 UQCR11O14957 56 aa1.68□□□□□ -2.14
CLK4-207ENST00000520909 MT1FP04733 61 aa1.68□□□□□ -2.14
CLK4-207ENST00000520909 SPATA8Q6RVD6 105 aa1.68□□□□□ -2.14
CLK4-207ENST00000520909 R4GN34 69 aa1.68□□□□□ -2.14
CLK4-207ENST00000520909 A0A0D9SG42 100 aa1.67□□□□□ -2.14
CLK4-207ENST00000520909 MIR22HGQ0VDD5 57 aa1.67□□□□□ -2.14
CLK4-207ENST00000520909 KRTAP13-4Q3LI77 160 aa1.67□□□□□ -2.14
CLK4-207ENST00000520909 LINC01554Q52M75 96 aa1.67□□□□□ -2.14
CLK4-207ENST00000520909 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
CLK4-207ENST00000520909 BRK1Q8WUW1 75 aa1.66□□□□□ -2.14
CLK4-207ENST00000520909 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
CLK4-207ENST00000520909 PRO0628Q9UI54 55 aa1.65□□□□□ -2.15
CLK4-207ENST00000520909 USH2AO75445 5202 aa1.64□□□□□ -2.15
CLK4-207ENST00000520909 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
CLK4-207ENST00000520909 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
CLK4-207ENST00000520909 K7ERS5 55 aa1.62□□□□□ -2.15
CLK4-207ENST00000520909 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
CLK4-207ENST00000520909 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
CLK4-207ENST00000520909 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
CLK4-207ENST00000520909 A6NN06 94 aa1.6□□□□□ -2.15
CLK4-207ENST00000520909 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
CLK4-207ENST00000520909 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.15
CLK4-207ENST00000520909 MT1BP07438 61 aa1.59□□□□□ -2.16
CLK4-207ENST00000520909 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
CLK4-207ENST00000520909 PMAIP1Q13794 54 aa1.56□□□□□ -2.16
CLK4-207ENST00000520909 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
CLK4-207ENST00000520909 ROMO1P60602 79 aa1.54□□□□□ -2.16
CLK4-207ENST00000520909 MT1XP80297 61 aa1.53□□□□□ -2.16
CLK4-207ENST00000520909 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
CLK4-207ENST00000520909 PRO2289Q9P1D8 64 aa1.53□□□□□ -2.16
CLK4-207ENST00000520909 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
CLK4-207ENST00000520909 TNP1P09430 55 aa1.49□□□□□ -2.17
CLK4-207ENST00000520909 KRTAP25-1Q3LHN0 102 aa1.48□□□□□ -2.17
CLK4-207ENST00000520909 KMT2DO14686 5537 aa1.47□□□□□ -2.17
CLK4-207ENST00000520909 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
CLK4-207ENST00000520909 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
CLK4-207ENST00000520909 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
CLK4-207ENST00000520909 SYNE2Q8WXH0 6885 aaKnown RBP1.41□□□□□ -2.18
CLK4-207ENST00000520909 KRTAP8-1Q8IUC2 63 aa1.4□□□□□ -2.19
CLK4-207ENST00000520909 MDN1Q9NU22 5596 aa1.4□□□□□ -2.19
CLK4-207ENST00000520909 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
CLK4-207ENST00000520909 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
CLK4-207ENST00000520909 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
CLK4-207ENST00000520909 NEBP20929 6669 aa1.35□□□□□ -2.19
CLK4-207ENST00000520909 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
CLK4-207ENST00000520909 MT1EP04732 61 aa1.34□□□□□ -2.2
CLK4-207ENST00000520909 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.2
CLK4-207ENST00000520909 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.2
CLK4-207ENST00000520909 MT1LQ93083 61 aa1.31□□□□□ -2.2
CLK4-207ENST00000520909 SPRR2EP22531 72 aa1.29□□□□□ -2.2
CLK4-207ENST00000520909 SPRR2BP35325 72 aa1.29□□□□□ -2.2
CLK4-207ENST00000520909 SPRR2AP35326 72 aa1.29□□□□□ -2.2
CLK4-207ENST00000520909 KRTAP19-3Q7Z4W3 81 aa1.29□□□□□ -2.2
CLK4-207ENST00000520909 MT1GP13640 62 aa1.28□□□□□ -2.2
CLK4-207ENST00000520909 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
CLK4-207ENST00000520909 MT1MQ8N339 61 aa1.27□□□□□ -2.21
CLK4-207ENST00000520909 SPRR2DP22532 72 aa1.24□□□□□ -2.21
CLK4-207ENST00000520909 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
CLK4-207ENST00000520909 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
CLK4-207ENST00000520909 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CLK4-207ENST00000520909 MT1AP04731 61 aa1.11□□□□□ -2.23
CLK4-207ENST00000520909 KRTAP6-1Q3LI64 71 aa1.11□□□□□ -2.23
CLK4-207ENST00000520909 MT4P47944 62 aa1.09□□□□□ -2.24
CLK4-207ENST00000520909 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
CLK4-207ENST00000520909 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
CLK4-207ENST00000520909 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
CLK4-207ENST00000520909 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
CLK4-207ENST00000520909 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
CLK4-207ENST00000520909 INE1O15225 51 aa0.95□□□□□ -2.26
CLK4-207ENST00000520909 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
CLK4-207ENST00000520909 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
CLK4-207ENST00000520909 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
CLK4-207ENST00000520909 PRM1P04553 51 aa0.8□□□□□ -2.28
CLK4-207ENST00000520909 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
CLK4-207ENST00000520909 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 67.8 ms