RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
CPEB4-208ENST00000520867 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
CPEB4-208ENST00000520867 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
CPEB4-208ENST00000520867 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
CPEB4-208ENST00000520867 MT1LQ93083 61 aa3.91□□□□□ -1.78
CPEB4-208ENST00000520867 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
CPEB4-208ENST00000520867 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
CPEB4-208ENST00000520867 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
CPEB4-208ENST00000520867 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
CPEB4-208ENST00000520867 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
CPEB4-208ENST00000520867 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
CPEB4-208ENST00000520867 MT1EP04732 61 aa3.8□□□□□ -1.8
CPEB4-208ENST00000520867 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
CPEB4-208ENST00000520867 MT1GP13640 62 aa3.72□□□□□ -1.81
CPEB4-208ENST00000520867 MT1AP04731 61 aa3.7□□□□□ -1.82
CPEB4-208ENST00000520867 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
CPEB4-208ENST00000520867 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
CPEB4-208ENST00000520867 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
CPEB4-208ENST00000520867 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
CPEB4-208ENST00000520867 LCE2BO14633 110 aa3.63□□□□□ -1.83
CPEB4-208ENST00000520867 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
CPEB4-208ENST00000520867 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
CPEB4-208ENST00000520867 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
CPEB4-208ENST00000520867 USH2AO75445 5202 aa3.59□□□□□ -1.83
CPEB4-208ENST00000520867 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
CPEB4-208ENST00000520867 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
CPEB4-208ENST00000520867 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
CPEB4-208ENST00000520867 MT1MQ8N339 61 aa3.48□□□□□ -1.85
CPEB4-208ENST00000520867 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
CPEB4-208ENST00000520867 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
CPEB4-208ENST00000520867 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
CPEB4-208ENST00000520867 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
CPEB4-208ENST00000520867 NEBP20929 6669 aa3.33□□□□□ -1.88
CPEB4-208ENST00000520867 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
CPEB4-208ENST00000520867 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
CPEB4-208ENST00000520867 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
CPEB4-208ENST00000520867 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
CPEB4-208ENST00000520867 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
CPEB4-208ENST00000520867 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
CPEB4-208ENST00000520867 SPRR2AP35326 72 aa3.14□□□□□ -1.91
CPEB4-208ENST00000520867 SPRR2EP22531 72 aa3.07□□□□□ -1.92
CPEB4-208ENST00000520867 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CPEB4-208ENST00000520867 SPRR2BP35325 72 aa3.02□□□□□ -1.93
CPEB4-208ENST00000520867 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CPEB4-208ENST00000520867 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
CPEB4-208ENST00000520867 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
CPEB4-208ENST00000520867 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
CPEB4-208ENST00000520867 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
CPEB4-208ENST00000520867 MT3P25713 68 aa2.88□□□□□ -1.95
CPEB4-208ENST00000520867 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CPEB4-208ENST00000520867 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CPEB4-208ENST00000520867 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
CPEB4-208ENST00000520867 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
CPEB4-208ENST00000520867 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CPEB4-208ENST00000520867 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
CPEB4-208ENST00000520867 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
CPEB4-208ENST00000520867 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CPEB4-208ENST00000520867 MUC5ACP98088 5654 aa2.58□□□□□ -2
CPEB4-208ENST00000520867 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
CPEB4-208ENST00000520867 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
CPEB4-208ENST00000520867 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
CPEB4-208ENST00000520867 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
CPEB4-208ENST00000520867 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CPEB4-208ENST00000520867 MT4P47944 62 aa2.45□□□□□ -2.02
CPEB4-208ENST00000520867 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
CPEB4-208ENST00000520867 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
CPEB4-208ENST00000520867 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
CPEB4-208ENST00000520867 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
CPEB4-208ENST00000520867 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
CPEB4-208ENST00000520867 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
CPEB4-208ENST00000520867 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CPEB4-208ENST00000520867 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
CPEB4-208ENST00000520867 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CPEB4-208ENST00000520867 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
CPEB4-208ENST00000520867 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CPEB4-208ENST00000520867 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
CPEB4-208ENST00000520867 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 101.8 ms