RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MT1EP04732 61 aa4.25□□□□□ -1.73
TRAPPC9-208ENST00000520857 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
TRAPPC9-208ENST00000520857 MT1GP13640 62 aa4.22□□□□□ -1.73
TRAPPC9-208ENST00000520857 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
TRAPPC9-208ENST00000520857 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
TRAPPC9-208ENST00000520857 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
TRAPPC9-208ENST00000520857 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC9-208ENST00000520857 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
TRAPPC9-208ENST00000520857 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
TRAPPC9-208ENST00000520857 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
TRAPPC9-208ENST00000520857 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
TRAPPC9-208ENST00000520857 MT1MQ8N339 61 aa3.99□□□□□ -1.77
TRAPPC9-208ENST00000520857 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
TRAPPC9-208ENST00000520857 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
TRAPPC9-208ENST00000520857 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
TRAPPC9-208ENST00000520857 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
TRAPPC9-208ENST00000520857 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC9-208ENST00000520857 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
TRAPPC9-208ENST00000520857 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
TRAPPC9-208ENST00000520857 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
TRAPPC9-208ENST00000520857 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
TRAPPC9-208ENST00000520857 PRM1P04553 51 aa3.74□□□□□ -1.81
TRAPPC9-208ENST00000520857 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
TRAPPC9-208ENST00000520857 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
TRAPPC9-208ENST00000520857 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
TRAPPC9-208ENST00000520857 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
TRAPPC9-208ENST00000520857 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
TRAPPC9-208ENST00000520857 MT1AP04731 61 aa3.62□□□□□ -1.83
TRAPPC9-208ENST00000520857 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC9-208ENST00000520857 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
TRAPPC9-208ENST00000520857 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
TRAPPC9-208ENST00000520857 SPRR2EP22531 72 aa3.46□□□□□ -1.86
TRAPPC9-208ENST00000520857 SPRR2BP35325 72 aa3.46□□□□□ -1.86
TRAPPC9-208ENST00000520857 SPRR2AP35326 72 aa3.46□□□□□ -1.86
TRAPPC9-208ENST00000520857 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
TRAPPC9-208ENST00000520857 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
TRAPPC9-208ENST00000520857 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
TRAPPC9-208ENST00000520857 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC9-208ENST00000520857 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
TRAPPC9-208ENST00000520857 MT3P25713 68 aa3.31□□□□□ -1.88
TRAPPC9-208ENST00000520857 SPRR2DP22532 72 aa3.29□□□□□ -1.88
TRAPPC9-208ENST00000520857 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
TRAPPC9-208ENST00000520857 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
TRAPPC9-208ENST00000520857 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
TRAPPC9-208ENST00000520857 NEBP20929 6669 aa3.09□□□□□ -1.91
TRAPPC9-208ENST00000520857 MT4P47944 62 aa3.03□□□□□ -1.93
TRAPPC9-208ENST00000520857 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
TRAPPC9-208ENST00000520857 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
TRAPPC9-208ENST00000520857 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
TRAPPC9-208ENST00000520857 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
TRAPPC9-208ENST00000520857 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
TRAPPC9-208ENST00000520857 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
TRAPPC9-208ENST00000520857 LCE4AQ5TA78 99 aa2.78□□□□□ -1.97
TRAPPC9-208ENST00000520857 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
TRAPPC9-208ENST00000520857 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
TRAPPC9-208ENST00000520857 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
TRAPPC9-208ENST00000520857 LCE1FQ5T754 118 aa2.65□□□□□ -1.98
TRAPPC9-208ENST00000520857 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
TRAPPC9-208ENST00000520857 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
TRAPPC9-208ENST00000520857 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
TRAPPC9-208ENST00000520857 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TRAPPC9-208ENST00000520857 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
TRAPPC9-208ENST00000520857 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
TRAPPC9-208ENST00000520857 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
TRAPPC9-208ENST00000520857 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TRAPPC9-208ENST00000520857 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TRAPPC9-208ENST00000520857 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
TRAPPC9-208ENST00000520857 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
TRAPPC9-208ENST00000520857 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
TRAPPC9-208ENST00000520857 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
TRAPPC9-208ENST00000520857 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
TRAPPC9-208ENST00000520857 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC9-208ENST00000520857 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
TRAPPC9-208ENST00000520857 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
TRAPPC9-208ENST00000520857 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
TRAPPC9-208ENST00000520857 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
TRAPPC9-208ENST00000520857 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
TRAPPC9-208ENST00000520857 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms