RNA–Protein interactions for RNA: ENST00000520486.5

CCDC25-207, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-207ENST00000520486 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
CCDC25-207ENST00000520486 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
CCDC25-207ENST00000520486 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CCDC25-207ENST00000520486 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
CCDC25-207ENST00000520486 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
CCDC25-207ENST00000520486 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
CCDC25-207ENST00000520486 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
CCDC25-207ENST00000520486 MT1EP04732 61 aa3.26□□□□□ -1.89
CCDC25-207ENST00000520486 MT1LQ93083 61 aa3.26□□□□□ -1.89
CCDC25-207ENST00000520486 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
CCDC25-207ENST00000520486 MT1GP13640 62 aa3.2□□□□□ -1.9
CCDC25-207ENST00000520486 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
CCDC25-207ENST00000520486 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
CCDC25-207ENST00000520486 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
CCDC25-207ENST00000520486 INE1O15225 51 aa3.12□□□□□ -1.91
CCDC25-207ENST00000520486 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
CCDC25-207ENST00000520486 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
CCDC25-207ENST00000520486 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
CCDC25-207ENST00000520486 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
CCDC25-207ENST00000520486 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
CCDC25-207ENST00000520486 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
CCDC25-207ENST00000520486 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
CCDC25-207ENST00000520486 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
CCDC25-207ENST00000520486 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
CCDC25-207ENST00000520486 SPRR2EP22531 72 aa2.82□□□□□ -1.96
CCDC25-207ENST00000520486 SPRR2BP35325 72 aa2.82□□□□□ -1.96
CCDC25-207ENST00000520486 SPRR2AP35326 72 aa2.82□□□□□ -1.96
CCDC25-207ENST00000520486 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
CCDC25-207ENST00000520486 NEBP20929 6669 aa2.79□□□□□ -1.96
CCDC25-207ENST00000520486 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
CCDC25-207ENST00000520486 SPRR2DP22532 72 aa2.68□□□□□ -1.98
CCDC25-207ENST00000520486 MT1AP04731 61 aa2.67□□□□□ -1.98
CCDC25-207ENST00000520486 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CCDC25-207ENST00000520486 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.99
CCDC25-207ENST00000520486 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
CCDC25-207ENST00000520486 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
CCDC25-207ENST00000520486 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
CCDC25-207ENST00000520486 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CCDC25-207ENST00000520486 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
CCDC25-207ENST00000520486 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
CCDC25-207ENST00000520486 PRM1P04553 51 aa2.56□□□□□ -2
CCDC25-207ENST00000520486 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
CCDC25-207ENST00000520486 MT4P47944 62 aa2.51□□□□□ -2.01
CCDC25-207ENST00000520486 MT3P25713 68 aa2.43□□□□□ -2.02
CCDC25-207ENST00000520486 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
CCDC25-207ENST00000520486 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
CCDC25-207ENST00000520486 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
CCDC25-207ENST00000520486 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CCDC25-207ENST00000520486 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CCDC25-207ENST00000520486 LCE4AQ5TA78 99 aa2.32□□□□□ -2.04
CCDC25-207ENST00000520486 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
CCDC25-207ENST00000520486 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
CCDC25-207ENST00000520486 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
CCDC25-207ENST00000520486 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CCDC25-207ENST00000520486 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
CCDC25-207ENST00000520486 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
CCDC25-207ENST00000520486 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
CCDC25-207ENST00000520486 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
CCDC25-207ENST00000520486 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
CCDC25-207ENST00000520486 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
CCDC25-207ENST00000520486 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
CCDC25-207ENST00000520486 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
CCDC25-207ENST00000520486 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CCDC25-207ENST00000520486 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
CCDC25-207ENST00000520486 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
CCDC25-207ENST00000520486 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CCDC25-207ENST00000520486 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CCDC25-207ENST00000520486 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CCDC25-207ENST00000520486 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
CCDC25-207ENST00000520486 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
CCDC25-207ENST00000520486 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CCDC25-207ENST00000520486 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CCDC25-207ENST00000520486 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 97.9 ms