RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 MT1LQ93083 61 aa5.04□□□□□ -1.6
VEGFA-221ENST00000520265 Q1T7F1 81 aa5.03□□□□□ -1.6
VEGFA-221ENST00000520265 MT1MQ8N339 61 aa5.01□□□□□ -1.61
VEGFA-221ENST00000520265 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
VEGFA-221ENST00000520265 A6NED7 52 aa4.99□□□□□ -1.61
VEGFA-221ENST00000520265 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
VEGFA-221ENST00000520265 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
VEGFA-221ENST00000520265 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
VEGFA-221ENST00000520265 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
VEGFA-221ENST00000520265 PCP4P48539 62 aa4.89□□□□□ -1.63
VEGFA-221ENST00000520265 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
VEGFA-221ENST00000520265 MT4P47944 62 aa4.82□□□□□ -1.64
VEGFA-221ENST00000520265 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
VEGFA-221ENST00000520265 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
VEGFA-221ENST00000520265 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
VEGFA-221ENST00000520265 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
VEGFA-221ENST00000520265 ROMO1P60602 79 aa4.72□□□□□ -1.65
VEGFA-221ENST00000520265 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
VEGFA-221ENST00000520265 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
VEGFA-221ENST00000520265 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.66
VEGFA-221ENST00000520265 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
VEGFA-221ENST00000520265 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
VEGFA-221ENST00000520265 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
VEGFA-221ENST00000520265 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
VEGFA-221ENST00000520265 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
VEGFA-221ENST00000520265 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
VEGFA-221ENST00000520265 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
VEGFA-221ENST00000520265 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
VEGFA-221ENST00000520265 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
VEGFA-221ENST00000520265 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
VEGFA-221ENST00000520265 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
VEGFA-221ENST00000520265 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
VEGFA-221ENST00000520265 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
VEGFA-221ENST00000520265 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
VEGFA-221ENST00000520265 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
VEGFA-221ENST00000520265 MT1AP04731 61 aa4.29□□□□□ -1.72
VEGFA-221ENST00000520265 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
VEGFA-221ENST00000520265 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
VEGFA-221ENST00000520265 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
VEGFA-221ENST00000520265 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
VEGFA-221ENST00000520265 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
VEGFA-221ENST00000520265 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
VEGFA-221ENST00000520265 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
VEGFA-221ENST00000520265 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
VEGFA-221ENST00000520265 MT3P25713 68 aa3.94□□□□□ -1.78
VEGFA-221ENST00000520265 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
VEGFA-221ENST00000520265 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
VEGFA-221ENST00000520265 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
VEGFA-221ENST00000520265 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
VEGFA-221ENST00000520265 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
VEGFA-221ENST00000520265 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
VEGFA-221ENST00000520265 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
VEGFA-221ENST00000520265 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
VEGFA-221ENST00000520265 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
VEGFA-221ENST00000520265 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
VEGFA-221ENST00000520265 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
VEGFA-221ENST00000520265 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
VEGFA-221ENST00000520265 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
VEGFA-221ENST00000520265 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
VEGFA-221ENST00000520265 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
VEGFA-221ENST00000520265 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
VEGFA-221ENST00000520265 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
VEGFA-221ENST00000520265 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
VEGFA-221ENST00000520265 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
VEGFA-221ENST00000520265 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
VEGFA-221ENST00000520265 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
VEGFA-221ENST00000520265 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
VEGFA-221ENST00000520265 H3BS24 57 aa2.83□□□□□ -1.96
VEGFA-221ENST00000520265 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
VEGFA-221ENST00000520265 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
VEGFA-221ENST00000520265 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
VEGFA-221ENST00000520265 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
VEGFA-221ENST00000520265 PRM1P04553 51 aa2.44□□□□□ -2.02
VEGFA-221ENST00000520265 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
VEGFA-221ENST00000520265 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
VEGFA-221ENST00000520265 INE1O15225 51 aa2.14□□□□□ -2.07
VEGFA-221ENST00000520265 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
VEGFA-221ENST00000520265 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms