RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
CTNNA1-216ENST00000519489 VAMP8Q9BV40 100 aa1.67□□□□□ -2.14
CTNNA1-216ENST00000519489 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CTNNA1-216ENST00000519489 PRO0628Q9UI54 55 aa1.65□□□□□ -2.15
CTNNA1-216ENST00000519489 SPCS1Q9Y6A9 102 aa1.65□□□□□ -2.15
CTNNA1-216ENST00000519489 S100A2P29034 98 aa1.64□□□□□ -2.15
CTNNA1-216ENST00000519489 SPATA45Q537H7 98 aa1.64□□□□□ -2.15
CTNNA1-216ENST00000519489 H0Y9P7 68 aa1.62□□□□□ -2.15
CTNNA1-216ENST00000519489 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
CTNNA1-216ENST00000519489 TSTD3H0UI37 97 aa1.6□□□□□ -2.15
CTNNA1-216ENST00000519489 HSD52Q0P140 79 aa1.6□□□□□ -2.15
CTNNA1-216ENST00000519489 SPINT4Q6UDR6 99 aa1.6□□□□□ -2.15
CTNNA1-216ENST00000519489 ATOX1O00244 68 aa1.59□□□□□ -2.15
CTNNA1-216ENST00000519489 ANAPC13Q9BS18 74 aa1.59□□□□□ -2.15
CTNNA1-216ENST00000519489 UBL5Q9BZL1 73 aa1.59□□□□□ -2.15
CTNNA1-216ENST00000519489 SPANXA2-OT1Q8N9U9 137 aa1.58□□□□□ -2.16
CTNNA1-216ENST00000519489 TNP1P09430 55 aa1.57□□□□□ -2.16
CTNNA1-216ENST00000519489 LINC00208Q96KT6 92 aa1.57□□□□□ -2.16
CTNNA1-216ENST00000519489 UQCRQO14949 82 aa1.55□□□□□ -2.16
CTNNA1-216ENST00000519489 TRAV7A0A075B6U4 112 aa1.54□□□□□ -2.16
CTNNA1-216ENST00000519489 DMAC1Q96GE9 116 aa1.54□□□□□ -2.16
CTNNA1-216ENST00000519489 MP68P56378 58 aa1.53□□□□□ -2.16
CTNNA1-216ENST00000519489 K7ERS5 55 aa1.52□□□□□ -2.17
CTNNA1-216ENST00000519489 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
CTNNA1-216ENST00000519489 KRTAP25-1Q3LHN0 102 aa1.5□□□□□ -2.17
CTNNA1-216ENST00000519489 A6NED7 52 aa1.49□□□□□ -2.17
CTNNA1-216ENST00000519489 H3BT86 120 aa1.49□□□□□ -2.17
CTNNA1-216ENST00000519489 S100A6P06703 90 aa1.49□□□□□ -2.17
CTNNA1-216ENST00000519489 S100A1P23297 94 aa1.48□□□□□ -2.17
CTNNA1-216ENST00000519489 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
CTNNA1-216ENST00000519489 TAX1BP3O14907 124 aa1.46□□□□□ -2.18
CTNNA1-216ENST00000519489 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
CTNNA1-216ENST00000519489 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
CTNNA1-216ENST00000519489 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CTNNA1-216ENST00000519489 ACYP2P14621 99 aa1.43□□□□□ -2.18
CTNNA1-216ENST00000519489 UQCR10Q9UDW1 63 aa1.41□□□□□ -2.18
CTNNA1-216ENST00000519489 A0A1B0GU33 70 aa1.4□□□□□ -2.19
CTNNA1-216ENST00000519489 HIST1H4AP62805 103 aaKnown RBP1.4□□□□□ -2.19
CTNNA1-216ENST00000519489 SCGB1A1P11684 91 aa1.38□□□□□ -2.19
CTNNA1-216ENST00000519489 PMAIP1Q13794 54 aa1.36□□□□□ -2.19
CTNNA1-216ENST00000519489 M0R143 59 aa1.34□□□□□ -2.19
CTNNA1-216ENST00000519489 H3BPC8 53 aa1.32□□□□□ -2.2
CTNNA1-216ENST00000519489 SERP1Q9Y6X1 66 aa1.32□□□□□ -2.2
CTNNA1-216ENST00000519489 PYY3Q5JQD4 70 aa1.29□□□□□ -2.2
CTNNA1-216ENST00000519489 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
CTNNA1-216ENST00000519489 TMEM258P61165 79 aa1.22□□□□□ -2.21
CTNNA1-216ENST00000519489 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
CTNNA1-216ENST00000519489 SERP2Q8N6R1 65 aa1.18□□□□□ -2.22
CTNNA1-216ENST00000519489 SMIM20Q8N5G0 67 aa1.17□□□□□ -2.22
CTNNA1-216ENST00000519489 ETDBQ3ZM63 59 aa1.15□□□□□ -2.23
CTNNA1-216ENST00000519489 H7BZZ5 65 aa1.14□□□□□ -2.23
CTNNA1-216ENST00000519489 Q1T7F1 81 aa1.12□□□□□ -2.23
CTNNA1-216ENST00000519489 COA5Q86WW8 74 aa1.12□□□□□ -2.23
CTNNA1-216ENST00000519489 LINC00643Q86TS7 51 aa1.09□□□□□ -2.23
CTNNA1-216ENST00000519489 A0A1B0GU69 56 aa1.07□□□□□ -2.24
CTNNA1-216ENST00000519489 F8W1H4 67 aa1.06□□□□□ -2.24
CTNNA1-216ENST00000519489 SNURFQ9Y675 71 aa1.05□□□□□ -2.24
CTNNA1-216ENST00000519489 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
CTNNA1-216ENST00000519489 PRR15LQ9BU68 103 aa1.03□□□□□ -2.24
CTNNA1-216ENST00000519489 ROMO1P60602 79 aa1.02□□□□□ -2.25
CTNNA1-216ENST00000519489 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
CTNNA1-216ENST00000519489 RPS28P62857 69 aaKnown RBP0.99□□□□□ -2.25
CTNNA1-216ENST00000519489 CDC42SE1Q9NRR8 79 aa0.97□□□□□ -2.25
CTNNA1-216ENST00000519489 LOC105371267A0A1B0GV96 52 aa0.95□□□□□ -2.26
CTNNA1-216ENST00000519489 INE1O15225 51 aa0.94□□□□□ -2.26
CTNNA1-216ENST00000519489 BRK1Q8WUW1 75 aa0.94□□□□□ -2.26
CTNNA1-216ENST00000519489 COL5A1-AS1Q5SY13 56 aa0.93□□□□□ -2.26
CTNNA1-216ENST00000519489 COX7CP15954 63 aa0.92□□□□□ -2.26
CTNNA1-216ENST00000519489 MIR22HGQ0VDD5 57 aa0.92□□□□□ -2.26
CTNNA1-216ENST00000519489 SMIM6P0DI80 62 aa0.86□□□□□ -2.27
CTNNA1-216ENST00000519489 UQCR11O14957 56 aa0.82□□□□□ -2.28
CTNNA1-216ENST00000519489 J3QR89 54 aa0.81□□□□□ -2.28
CTNNA1-216ENST00000519489 K7ERU9 68 aa0.79□□□□□ -2.28
CTNNA1-216ENST00000519489 CCDC179H3BU77 68 aa0.71□□□□□ -2.3
CTNNA1-216ENST00000519489 LINC01558Q9Y6Z2 57 aa0.71□□□□□ -2.3
CTNNA1-216ENST00000519489 A0A1B0GV90 55 aa0.63□□□□□ -2.31
CTNNA1-216ENST00000519489 ATP5EP56381 51 aaPredicted RBP0.46□□□□□ -2.34
CTNNA1-216ENST00000519489 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 72.5 ms