RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 KRTAP4-3Q9BYR4 195 aa7.39□□□□□ -1.23
ARFGEF1-206ENST00000519436 LCE4AQ5TA78 99 aa7.38□□□□□ -1.23
ARFGEF1-206ENST00000519436 HMCN1Q96RW7 5635 aa7.29□□□□□ -1.24
ARFGEF1-206ENST00000519436 MT4P47944 62 aa7.28□□□□□ -1.24
ARFGEF1-206ENST00000519436 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
ARFGEF1-206ENST00000519436 UQCR11O14957 56 aa7.23□□□□□ -1.25
ARFGEF1-206ENST00000519436 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
ARFGEF1-206ENST00000519436 TMEM258P61165 79 aa7.23□□□□□ -1.25
ARFGEF1-206ENST00000519436 KRTAP4-7Q9BYR0 210 aa7.2□□□□□ -1.26
ARFGEF1-206ENST00000519436 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
ARFGEF1-206ENST00000519436 AHNAK2Q8IVF2 5795 aa7.09□□□□□ -1.27
ARFGEF1-206ENST00000519436 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
ARFGEF1-206ENST00000519436 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
ARFGEF1-206ENST00000519436 KRTAP5-5Q701N2 237 aaPredicted RBP6.97□□□□□ -1.29
ARFGEF1-206ENST00000519436 KRTAP5-10Q6L8G5 202 aa6.95□□□□□ -1.3
ARFGEF1-206ENST00000519436 K7ERS5 55 aa6.88□□□□□ -1.31
ARFGEF1-206ENST00000519436 PSPHP1O15172 72 aa6.87□□□□□ -1.31
ARFGEF1-206ENST00000519436 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
ARFGEF1-206ENST00000519436 Q1T7F1 81 aa6.85□□□□□ -1.31
ARFGEF1-206ENST00000519436 V9GYY9 64 aa6.85□□□□□ -1.31
ARFGEF1-206ENST00000519436 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
ARFGEF1-206ENST00000519436 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
ARFGEF1-206ENST00000519436 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
ARFGEF1-206ENST00000519436 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
ARFGEF1-206ENST00000519436 SYNE1Q8NF91 8797 aaKnown RBP6.8□□□□□ -1.32
ARFGEF1-206ENST00000519436 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
ARFGEF1-206ENST00000519436 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
ARFGEF1-206ENST00000519436 KRTAP12-4P60329 112 aa6.73□□□□□ -1.33
ARFGEF1-206ENST00000519436 KRTAP5-7Q6L8G8 165 aa6.7□□□□□ -1.34
ARFGEF1-206ENST00000519436 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
ARFGEF1-206ENST00000519436 A6NED7 52 aa6.6□□□□□ -1.35
ARFGEF1-206ENST00000519436 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
ARFGEF1-206ENST00000519436 ROMO1P60602 79 aa6.46□□□□□ -1.38
ARFGEF1-206ENST00000519436 MT1AP04731 61 aa6.42□□□□□ -1.38
ARFGEF1-206ENST00000519436 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
ARFGEF1-206ENST00000519436 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.38
ARFGEF1-206ENST00000519436 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
ARFGEF1-206ENST00000519436 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
ARFGEF1-206ENST00000519436 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
ARFGEF1-206ENST00000519436 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
ARFGEF1-206ENST00000519436 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
ARFGEF1-206ENST00000519436 PCP4P48539 62 aa6.11□□□□□ -1.43
ARFGEF1-206ENST00000519436 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
ARFGEF1-206ENST00000519436 KRTAP5-8O75690 187 aa6.09□□□□□ -1.43
ARFGEF1-206ENST00000519436 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
ARFGEF1-206ENST00000519436 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
ARFGEF1-206ENST00000519436 MT3P25713 68 aa5.87□□□□□ -1.47
ARFGEF1-206ENST00000519436 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
ARFGEF1-206ENST00000519436 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
ARFGEF1-206ENST00000519436 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
ARFGEF1-206ENST00000519436 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
ARFGEF1-206ENST00000519436 H3BS24 57 aa5.56□□□□□ -1.52
ARFGEF1-206ENST00000519436 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
ARFGEF1-206ENST00000519436 LCE1EQ5T753 118 aa5.44□□□□□ -1.54
ARFGEF1-206ENST00000519436 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
ARFGEF1-206ENST00000519436 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
ARFGEF1-206ENST00000519436 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
ARFGEF1-206ENST00000519436 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
ARFGEF1-206ENST00000519436 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
ARFGEF1-206ENST00000519436 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
ARFGEF1-206ENST00000519436 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
ARFGEF1-206ENST00000519436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
ARFGEF1-206ENST00000519436 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
ARFGEF1-206ENST00000519436 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
ARFGEF1-206ENST00000519436 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
ARFGEF1-206ENST00000519436 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
ARFGEF1-206ENST00000519436 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
ARFGEF1-206ENST00000519436 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
ARFGEF1-206ENST00000519436 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
ARFGEF1-206ENST00000519436 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
ARFGEF1-206ENST00000519436 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
ARFGEF1-206ENST00000519436 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
ARFGEF1-206ENST00000519436 PRM1P04553 51 aa3.29□□□□□ -1.88
ARFGEF1-206ENST00000519436 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
ARFGEF1-206ENST00000519436 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
ARFGEF1-206ENST00000519436 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
ARFGEF1-206ENST00000519436 INE1O15225 51 aa2.68□□□□□ -1.98
ARFGEF1-206ENST00000519436 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 260.3 ms