RNA–Protein interactions for RNA: ENST00000519278.5

NDRG1-212, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-212ENST00000519278 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
NDRG1-212ENST00000519278 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
NDRG1-212ENST00000519278 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
NDRG1-212ENST00000519278 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
NDRG1-212ENST00000519278 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
NDRG1-212ENST00000519278 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
NDRG1-212ENST00000519278 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
NDRG1-212ENST00000519278 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
NDRG1-212ENST00000519278 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
NDRG1-212ENST00000519278 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
NDRG1-212ENST00000519278 MT1EP04732 61 aa3.19□□□□□ -1.9
NDRG1-212ENST00000519278 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
NDRG1-212ENST00000519278 MT1LQ93083 61 aa3.18□□□□□ -1.9
NDRG1-212ENST00000519278 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
NDRG1-212ENST00000519278 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
NDRG1-212ENST00000519278 MT1GP13640 62 aa3.14□□□□□ -1.91
NDRG1-212ENST00000519278 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
NDRG1-212ENST00000519278 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
NDRG1-212ENST00000519278 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
NDRG1-212ENST00000519278 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
NDRG1-212ENST00000519278 SPRR2EP22531 72 aa3.05□□□□□ -1.92
NDRG1-212ENST00000519278 SPRR2BP35325 72 aa3.05□□□□□ -1.92
NDRG1-212ENST00000519278 SPRR2AP35326 72 aa3.05□□□□□ -1.92
NDRG1-212ENST00000519278 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
NDRG1-212ENST00000519278 PRM1P04553 51 aa3.05□□□□□ -1.92
NDRG1-212ENST00000519278 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
NDRG1-212ENST00000519278 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
NDRG1-212ENST00000519278 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
NDRG1-212ENST00000519278 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
NDRG1-212ENST00000519278 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
NDRG1-212ENST00000519278 SPRR2DP22532 72 aa2.96□□□□□ -1.93
NDRG1-212ENST00000519278 MT1MQ8N339 61 aa2.94□□□□□ -1.94
NDRG1-212ENST00000519278 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
NDRG1-212ENST00000519278 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
NDRG1-212ENST00000519278 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
NDRG1-212ENST00000519278 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NDRG1-212ENST00000519278 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
NDRG1-212ENST00000519278 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
NDRG1-212ENST00000519278 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
NDRG1-212ENST00000519278 NEBP20929 6669 aa2.77□□□□□ -1.97
NDRG1-212ENST00000519278 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
NDRG1-212ENST00000519278 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
NDRG1-212ENST00000519278 MT1AP04731 61 aa2.73□□□□□ -1.97
NDRG1-212ENST00000519278 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
NDRG1-212ENST00000519278 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
NDRG1-212ENST00000519278 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
NDRG1-212ENST00000519278 MT4P47944 62 aa2.6□□□□□ -1.99
NDRG1-212ENST00000519278 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
NDRG1-212ENST00000519278 MT3P25713 68 aa2.5□□□□□ -2.01
NDRG1-212ENST00000519278 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
NDRG1-212ENST00000519278 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
NDRG1-212ENST00000519278 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
NDRG1-212ENST00000519278 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
NDRG1-212ENST00000519278 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
NDRG1-212ENST00000519278 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
NDRG1-212ENST00000519278 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
NDRG1-212ENST00000519278 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
NDRG1-212ENST00000519278 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
NDRG1-212ENST00000519278 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
NDRG1-212ENST00000519278 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
NDRG1-212ENST00000519278 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
NDRG1-212ENST00000519278 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
NDRG1-212ENST00000519278 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
NDRG1-212ENST00000519278 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
NDRG1-212ENST00000519278 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
NDRG1-212ENST00000519278 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
NDRG1-212ENST00000519278 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
NDRG1-212ENST00000519278 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
NDRG1-212ENST00000519278 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
NDRG1-212ENST00000519278 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
NDRG1-212ENST00000519278 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
NDRG1-212ENST00000519278 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
NDRG1-212ENST00000519278 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
NDRG1-212ENST00000519278 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
NDRG1-212ENST00000519278 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
NDRG1-212ENST00000519278 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
NDRG1-212ENST00000519278 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
NDRG1-212ENST00000519278 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms