RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MT1LQ93083 61 aa4.76□□□□□ -1.65
VEGFA-219ENST00000518824 MT1GP13640 62 aa4.74□□□□□ -1.65
VEGFA-219ENST00000518824 MT1MQ8N339 61 aa4.72□□□□□ -1.65
VEGFA-219ENST00000518824 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
VEGFA-219ENST00000518824 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
VEGFA-219ENST00000518824 PSPHP1O15172 72 aa4.69□□□□□ -1.66
VEGFA-219ENST00000518824 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
VEGFA-219ENST00000518824 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
VEGFA-219ENST00000518824 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
VEGFA-219ENST00000518824 Q1T7F1 81 aa4.64□□□□□ -1.67
VEGFA-219ENST00000518824 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
VEGFA-219ENST00000518824 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
VEGFA-219ENST00000518824 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
VEGFA-219ENST00000518824 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
VEGFA-219ENST00000518824 H3BS24 57 aa4.54□□□□□ -1.68
VEGFA-219ENST00000518824 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
VEGFA-219ENST00000518824 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
VEGFA-219ENST00000518824 K7ERS5 55 aa4.5□□□□□ -1.69
VEGFA-219ENST00000518824 A6NED7 52 aa4.48□□□□□ -1.69
VEGFA-219ENST00000518824 MT4P47944 62 aa4.48□□□□□ -1.69
VEGFA-219ENST00000518824 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
VEGFA-219ENST00000518824 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
VEGFA-219ENST00000518824 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
VEGFA-219ENST00000518824 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
VEGFA-219ENST00000518824 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
VEGFA-219ENST00000518824 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
VEGFA-219ENST00000518824 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
VEGFA-219ENST00000518824 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
VEGFA-219ENST00000518824 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
VEGFA-219ENST00000518824 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
VEGFA-219ENST00000518824 ROMO1P60602 79 aa4.3□□□□□ -1.72
VEGFA-219ENST00000518824 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
VEGFA-219ENST00000518824 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
VEGFA-219ENST00000518824 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
VEGFA-219ENST00000518824 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
VEGFA-219ENST00000518824 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
VEGFA-219ENST00000518824 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
VEGFA-219ENST00000518824 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
VEGFA-219ENST00000518824 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
VEGFA-219ENST00000518824 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
VEGFA-219ENST00000518824 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
VEGFA-219ENST00000518824 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
VEGFA-219ENST00000518824 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
VEGFA-219ENST00000518824 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
VEGFA-219ENST00000518824 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
VEGFA-219ENST00000518824 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
VEGFA-219ENST00000518824 MT1AP04731 61 aa4.02□□□□□ -1.77
VEGFA-219ENST00000518824 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
VEGFA-219ENST00000518824 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
VEGFA-219ENST00000518824 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
VEGFA-219ENST00000518824 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
VEGFA-219ENST00000518824 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
VEGFA-219ENST00000518824 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
VEGFA-219ENST00000518824 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
VEGFA-219ENST00000518824 MT3P25713 68 aa3.64□□□□□ -1.83
VEGFA-219ENST00000518824 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
VEGFA-219ENST00000518824 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
VEGFA-219ENST00000518824 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
VEGFA-219ENST00000518824 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
VEGFA-219ENST00000518824 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
VEGFA-219ENST00000518824 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
VEGFA-219ENST00000518824 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
VEGFA-219ENST00000518824 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
VEGFA-219ENST00000518824 INE1O15225 51 aa3.13□□□□□ -1.91
VEGFA-219ENST00000518824 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
VEGFA-219ENST00000518824 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
VEGFA-219ENST00000518824 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
VEGFA-219ENST00000518824 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
VEGFA-219ENST00000518824 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
VEGFA-219ENST00000518824 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
VEGFA-219ENST00000518824 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
VEGFA-219ENST00000518824 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
VEGFA-219ENST00000518824 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
VEGFA-219ENST00000518824 PRM1P04553 51 aa2.24□□□□□ -2.05
VEGFA-219ENST00000518824 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
VEGFA-219ENST00000518824 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
VEGFA-219ENST00000518824 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 93.3 ms