RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
PCM1-206ENST00000518537 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
PCM1-206ENST00000518537 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
PCM1-206ENST00000518537 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
PCM1-206ENST00000518537 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
PCM1-206ENST00000518537 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
PCM1-206ENST00000518537 MT1GP13640 62 aa5.65□□□□□ -1.51
PCM1-206ENST00000518537 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
PCM1-206ENST00000518537 MT1MQ8N339 61 aa5.6□□□□□ -1.51
PCM1-206ENST00000518537 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
PCM1-206ENST00000518537 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
PCM1-206ENST00000518537 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
PCM1-206ENST00000518537 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
PCM1-206ENST00000518537 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
PCM1-206ENST00000518537 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
PCM1-206ENST00000518537 NEBP20929 6669 aa5.4□□□□□ -1.55
PCM1-206ENST00000518537 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
PCM1-206ENST00000518537 SPRR2EP22531 72 aa5.38□□□□□ -1.55
PCM1-206ENST00000518537 SPRR2BP35325 72 aa5.38□□□□□ -1.55
PCM1-206ENST00000518537 SPRR2AP35326 72 aa5.38□□□□□ -1.55
PCM1-206ENST00000518537 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
PCM1-206ENST00000518537 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
PCM1-206ENST00000518537 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
PCM1-206ENST00000518537 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
PCM1-206ENST00000518537 SPRR2DP22532 72 aa5.17□□□□□ -1.58
PCM1-206ENST00000518537 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
PCM1-206ENST00000518537 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
PCM1-206ENST00000518537 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
PCM1-206ENST00000518537 INE1O15225 51 aa5.02□□□□□ -1.61
PCM1-206ENST00000518537 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
PCM1-206ENST00000518537 MT1AP04731 61 aa4.98□□□□□ -1.61
PCM1-206ENST00000518537 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
PCM1-206ENST00000518537 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
PCM1-206ENST00000518537 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
PCM1-206ENST00000518537 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
PCM1-206ENST00000518537 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
PCM1-206ENST00000518537 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
PCM1-206ENST00000518537 KRTAP4-9Q9BYQ8 210 aa4.65□□□□□ -1.66
PCM1-206ENST00000518537 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
PCM1-206ENST00000518537 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
PCM1-206ENST00000518537 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
PCM1-206ENST00000518537 MT3P25713 68 aa4.51□□□□□ -1.69
PCM1-206ENST00000518537 MT4P47944 62 aa4.5□□□□□ -1.69
PCM1-206ENST00000518537 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
PCM1-206ENST00000518537 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
PCM1-206ENST00000518537 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
PCM1-206ENST00000518537 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
PCM1-206ENST00000518537 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
PCM1-206ENST00000518537 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
PCM1-206ENST00000518537 GPR98Q8WXG9 6306 aa4.24□□□□□ -1.73
PCM1-206ENST00000518537 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
PCM1-206ENST00000518537 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
PCM1-206ENST00000518537 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
PCM1-206ENST00000518537 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
PCM1-206ENST00000518537 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
PCM1-206ENST00000518537 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
PCM1-206ENST00000518537 PRM1P04553 51 aa3.95□□□□□ -1.78
PCM1-206ENST00000518537 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
PCM1-206ENST00000518537 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
PCM1-206ENST00000518537 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
PCM1-206ENST00000518537 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
PCM1-206ENST00000518537 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
PCM1-206ENST00000518537 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
PCM1-206ENST00000518537 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
PCM1-206ENST00000518537 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
PCM1-206ENST00000518537 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
PCM1-206ENST00000518537 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
PCM1-206ENST00000518537 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PCM1-206ENST00000518537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
PCM1-206ENST00000518537 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
PCM1-206ENST00000518537 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
PCM1-206ENST00000518537 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
PCM1-206ENST00000518537 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
PCM1-206ENST00000518537 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PCM1-206ENST00000518537 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PCM1-206ENST00000518537 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
PCM1-206ENST00000518537 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms