RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 KRTAP19-6Q3LI70 58 aa3.31□□□□□ -1.88
ARFGEF1-203ENST00000518230 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
ARFGEF1-203ENST00000518230 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
ARFGEF1-203ENST00000518230 MT1LQ93083 61 aa3.28□□□□□ -1.89
ARFGEF1-203ENST00000518230 MT1EP04732 61 aa3.23□□□□□ -1.89
ARFGEF1-203ENST00000518230 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
ARFGEF1-203ENST00000518230 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
ARFGEF1-203ENST00000518230 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
ARFGEF1-203ENST00000518230 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
ARFGEF1-203ENST00000518230 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.9
ARFGEF1-203ENST00000518230 MT1GP13640 62 aa3.15□□□□□ -1.91
ARFGEF1-203ENST00000518230 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
ARFGEF1-203ENST00000518230 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
ARFGEF1-203ENST00000518230 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
ARFGEF1-203ENST00000518230 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
ARFGEF1-203ENST00000518230 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
ARFGEF1-203ENST00000518230 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
ARFGEF1-203ENST00000518230 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
ARFGEF1-203ENST00000518230 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
ARFGEF1-203ENST00000518230 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
ARFGEF1-203ENST00000518230 MT1MQ8N339 61 aa3.02□□□□□ -1.93
ARFGEF1-203ENST00000518230 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
ARFGEF1-203ENST00000518230 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
ARFGEF1-203ENST00000518230 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
ARFGEF1-203ENST00000518230 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
ARFGEF1-203ENST00000518230 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
ARFGEF1-203ENST00000518230 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
ARFGEF1-203ENST00000518230 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
ARFGEF1-203ENST00000518230 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
ARFGEF1-203ENST00000518230 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
ARFGEF1-203ENST00000518230 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
ARFGEF1-203ENST00000518230 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
ARFGEF1-203ENST00000518230 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
ARFGEF1-203ENST00000518230 PRM1P04553 51 aa2.81□□□□□ -1.96
ARFGEF1-203ENST00000518230 MT1AP04731 61 aa2.81□□□□□ -1.96
ARFGEF1-203ENST00000518230 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
ARFGEF1-203ENST00000518230 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
ARFGEF1-203ENST00000518230 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
ARFGEF1-203ENST00000518230 SPRR2EP22531 72 aa2.76□□□□□ -1.97
ARFGEF1-203ENST00000518230 SPRR2BP35325 72 aa2.76□□□□□ -1.97
ARFGEF1-203ENST00000518230 SPRR2AP35326 72 aa2.76□□□□□ -1.97
ARFGEF1-203ENST00000518230 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
ARFGEF1-203ENST00000518230 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
ARFGEF1-203ENST00000518230 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
ARFGEF1-203ENST00000518230 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.98
ARFGEF1-203ENST00000518230 SPRR2DP22532 72 aa2.64□□□□□ -1.99
ARFGEF1-203ENST00000518230 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
ARFGEF1-203ENST00000518230 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
ARFGEF1-203ENST00000518230 NEBP20929 6669 aa2.55□□□□□ -2
ARFGEF1-203ENST00000518230 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
ARFGEF1-203ENST00000518230 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
ARFGEF1-203ENST00000518230 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
ARFGEF1-203ENST00000518230 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
ARFGEF1-203ENST00000518230 MT3P25713 68 aa2.42□□□□□ -2.02
ARFGEF1-203ENST00000518230 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
ARFGEF1-203ENST00000518230 MT4P47944 62 aa2.33□□□□□ -2.04
ARFGEF1-203ENST00000518230 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
ARFGEF1-203ENST00000518230 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
ARFGEF1-203ENST00000518230 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
ARFGEF1-203ENST00000518230 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ARFGEF1-203ENST00000518230 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
ARFGEF1-203ENST00000518230 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
ARFGEF1-203ENST00000518230 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
ARFGEF1-203ENST00000518230 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
ARFGEF1-203ENST00000518230 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
ARFGEF1-203ENST00000518230 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
ARFGEF1-203ENST00000518230 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
ARFGEF1-203ENST00000518230 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
ARFGEF1-203ENST00000518230 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
ARFGEF1-203ENST00000518230 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
ARFGEF1-203ENST00000518230 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
ARFGEF1-203ENST00000518230 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
ARFGEF1-203ENST00000518230 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
ARFGEF1-203ENST00000518230 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
ARFGEF1-203ENST00000518230 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
ARFGEF1-203ENST00000518230 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
ARFGEF1-203ENST00000518230 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
ARFGEF1-203ENST00000518230 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 86.3 ms