RNA–Protein interactions for RNA: ENST00000518228.1

HACE1-207, Transcript of HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best)

Gene HACE1, Length 2,663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACE1-207ENST00000518228 ABCA13Q86UQ4 5058 aa1.31□□□□□ -2.2
HACE1-207ENST00000518228 SPRR2GQ9BYE4 73 aa1.31□□□□□ -2.2
HACE1-207ENST00000518228 PP632Q6XCG6 107 aa1.3□□□□□ -2.2
HACE1-207ENST00000518228 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
HACE1-207ENST00000518228 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
HACE1-207ENST00000518228 LRP2P98164 4655 aa1.29□□□□□ -2.2
HACE1-207ENST00000518228 HMCN2Q8NDA2 5059 aa1.28□□□□□ -2.2
HACE1-207ENST00000518228 FLGP20930 4061 aaPredicted RBP1.28□□□□□ -2.2
HACE1-207ENST00000518228 MT1HP80294 61 aa1.28□□□□□ -2.2
HACE1-207ENST00000518228 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
HACE1-207ENST00000518228 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
HACE1-207ENST00000518228 NEBP20929 6669 aa1.26□□□□□ -2.21
HACE1-207ENST00000518228 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
HACE1-207ENST00000518228 PLAC4Q8WY50 150 aa1.25□□□□□ -2.21
HACE1-207ENST00000518228 MT2AP02795 61 aa1.24□□□□□ -2.21
HACE1-207ENST00000518228 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
HACE1-207ENST00000518228 UBR4Q5T4S7 5183 aa1.23□□□□□ -2.21
HACE1-207ENST00000518228 TNP1P09430 55 aa1.23□□□□□ -2.21
HACE1-207ENST00000518228 KRTAP10-10P60014 251 aa1.23□□□□□ -2.21
HACE1-207ENST00000518228 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
HACE1-207ENST00000518228 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
HACE1-207ENST00000518228 M0R2T5 61 aa1.21□□□□□ -2.22
HACE1-207ENST00000518228 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
HACE1-207ENST00000518228 MT1FP04733 61 aa1.2□□□□□ -2.22
HACE1-207ENST00000518228 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
HACE1-207ENST00000518228 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
HACE1-207ENST00000518228 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
HACE1-207ENST00000518228 LPAP08519 4548 aa1.18□□□□□ -2.22
HACE1-207ENST00000518228 MUC2Q02817 5179 aa1.18□□□□□ -2.22
HACE1-207ENST00000518228 A0A0D9SG42 100 aa1.18□□□□□ -2.22
HACE1-207ENST00000518228 MT1BP07438 61 aa1.18□□□□□ -2.22
HACE1-207ENST00000518228 DMBT1Q9UGM3 2413 aaPredicted RBP1.17□□□□□ -2.22
HACE1-207ENST00000518228 KRTAP19-6Q3LI70 58 aa1.16□□□□□ -2.22
HACE1-207ENST00000518228 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
HACE1-207ENST00000518228 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
HACE1-207ENST00000518228 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
HACE1-207ENST00000518228 MT1XP80297 61 aa1.14□□□□□ -2.23
HACE1-207ENST00000518228 LCE3AQ5TA76 89 aa1.1□□□□□ -2.23
HACE1-207ENST00000518228 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
HACE1-207ENST00000518228 KRTAP6-3Q3LI67 103 aa1.09□□□□□ -2.23
HACE1-207ENST00000518228 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
HACE1-207ENST00000518228 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
HACE1-207ENST00000518228 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
HACE1-207ENST00000518228 KRTAP12-3P60328 96 aa1.06□□□□□ -2.24
HACE1-207ENST00000518228 MT1EP04732 61 aa1.04□□□□□ -2.24
HACE1-207ENST00000518228 MT1GP13640 62 aa1.02□□□□□ -2.25
HACE1-207ENST00000518228 USH2AO75445 5202 aa1.01□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
HACE1-207ENST00000518228 MT1LQ93083 61 aa1.01□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP12-4P60329 112 aa1□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
HACE1-207ENST00000518228 MT1MQ8N339 61 aa0.97□□□□□ -2.25
HACE1-207ENST00000518228 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
HACE1-207ENST00000518228 KMT2DO14686 5537 aa0.92□□□□□ -2.26
HACE1-207ENST00000518228 MT1AP04731 61 aa0.91□□□□□ -2.26
HACE1-207ENST00000518228 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
HACE1-207ENST00000518228 SPRR2EP22531 72 aa0.89□□□□□ -2.27
HACE1-207ENST00000518228 SPRR2BP35325 72 aa0.89□□□□□ -2.27
HACE1-207ENST00000518228 SPRR2AP35326 72 aa0.89□□□□□ -2.27
HACE1-207ENST00000518228 FSIP2Q5CZC0 6907 aa0.88□□□□□ -2.27
HACE1-207ENST00000518228 SPRR2DP22532 72 aa0.87□□□□□ -2.27
HACE1-207ENST00000518228 MDN1Q9NU22 5596 aa0.87□□□□□ -2.27
HACE1-207ENST00000518228 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
HACE1-207ENST00000518228 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
HACE1-207ENST00000518228 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
HACE1-207ENST00000518228 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
HACE1-207ENST00000518228 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
HACE1-207ENST00000518228 MUC19Q7Z5P9 8384 aa0.75□□□□□ -2.29
HACE1-207ENST00000518228 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
HACE1-207ENST00000518228 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.29
HACE1-207ENST00000518228 MT4P47944 62 aa0.65□□□□□ -2.3
HACE1-207ENST00000518228 PRM1P04553 51 aa0.6□□□□□ -2.31
HACE1-207ENST00000518228 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
HACE1-207ENST00000518228 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
HACE1-207ENST00000518228 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
HACE1-207ENST00000518228 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 38.8 ms